Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC008443.7-201ENST00000622195 246 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 AP002371.2-201ENST00000624450 503 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
MT-ND4P03905 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.21□□□□□ -2.06
MT-ND4P03905 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
MT-ND4P03905 RNU6-270P-201ENST00000364131 105 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 Y_RNA.234-201ENST00000364409 97 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 RNU1-100P-201ENST00000365255 165 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.2□□□□□ -2.06
MT-ND4P03905 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
MT-ND4P03905 RNU6-198P-201ENST00000384258 104 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 SNORD116-12-201ENST00000384468 92 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 RNU6-1072P-201ENST00000384703 107 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 RNU6-443P-201ENST00000384780 107 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 AC007064.1-201ENST00000412238 351 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.2□□□□□ -2.06
MT-ND4P03905 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.2□□□□□ -2.06
MT-ND4P03905 PPP1R11P2-201ENST00000423543 382 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 AC009414.1-201ENST00000427200 443 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 OR4K11P-201ENST00000431829 904 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 MTND4P6-201ENST00000438297 472 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 RPS24P13-201ENST00000442520 397 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.2□□□□□ -2.06
MT-ND4P03905 RPL31P50-201ENST00000471002 296 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
MT-ND4P03905 AL049874.1-201ENST00000489560 388 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 AC096571.1-202ENST00000506634 735 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 HMGB3P3-201ENST00000510526 400 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 TTC39CP1-201ENST00000512513 755 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
MT-ND4P03905 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.2□□□□□ -2.06
MT-ND4P03905 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.2□□□□□ -2.06
MT-ND4P03905 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.2□□□□□ -2.06
MT-ND4P03905 AC079600.2-201ENST00000550076 130 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 PRELID2P1-201ENST00000552837 301 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.2□□□□□ -2.06
MT-ND4P03905 ACTR3BP3-201ENST00000565577 979 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.2□□□□□ -2.06
MT-ND4P03905 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.2□□□□□ -2.06
MT-ND4P03905 AL645944.1-201ENST00000603857 493 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 PART1_2.1-201ENST00000612397 250 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 AL357080.1-201ENST00000617394 239 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 MIR6130-201ENST00000619419 109 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 AL121895.2-201ENST00000619558 447 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.2□□□□□ -2.06
MT-ND4P03905 LINC02211-204ENST00000642024 1070 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.2□□□□□ -2.06
MT-ND4P03905 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
MT-ND4P03905 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
MT-ND4P03905 TPTE2P4-201ENST00000258589 1605 ntBASIC2.2□□□□□ -2.06
MT-ND4P03905 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
MT-ND4P03905 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MT-ND4P03905 AL079343.1-201ENST00000572358 1771 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
MT-ND4P03905 MIR208A-201ENST00000362287 71 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 RNU6-461P-201ENST00000364195 107 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 RNU1-51P-201ENST00000365345 176 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MT-ND4P03905 MIR9-1-201ENST00000385198 89 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 MIR325-201ENST00000385260 98 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 MIR1290-201ENST00000408735 78 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 USP9YP20-201ENST00000419224 558 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.19□□□□□ -2.06
MT-ND4P03905 BX119904.4-201ENST00000424402 301 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.19□□□□□ -2.06
MT-ND4P03905 NANOGP2-201ENST00000435391 727 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 AC011816.1-201ENST00000441346 546 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 AC009237.8-201ENST00000445492 379 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 ARPC3P5-201ENST00000448802 534 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 AC092798.1-201ENST00000458542 409 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.19□□□□□ -2.06
MT-ND4P03905 AC097493.1-201ENST00000463958 372 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 RBM43P1-201ENST00000476891 1081 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 AL135752.1-201ENST00000479477 471 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 AC113155.1-201ENST00000511141 769 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.19□□□□□ -2.06
MT-ND4P03905 RNU6-928P-201ENST00000516876 104 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.19□□□□□ -2.06
MT-ND4P03905 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.19□□□□□ -2.06
MT-ND4P03905 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.19□□□□□ -2.06
MT-ND4P03905 BNIP3P27-201ENST00000599991 412 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 AC011451.2-201ENST00000604303 598 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 AL158211.4-201ENST00000606988 584 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 AL445264.1-201ENST00000621719 171 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 AC231657.1-201ENST00000624313 397 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 AC004808.1-201ENST00000627671 721 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.19□□□□□ -2.06
MT-ND4P03905 AC013437.2-201ENST00000639587 677 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MT-ND4P03905 PABPC1P9-201ENST00000426076 1612 ntBASIC2.19□□□□□ -2.06
MT-ND4P03905 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.19□□□□□ -2.06
MT-ND4P03905 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MT-ND4P03905 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MT-ND4P03905 OR4G2P-202ENST00000641004 1759 ntBASIC2.18□□□□□ -2.06
MT-ND4P03905 AC005832.2-201ENST00000538921 1430 ntBASIC2.18□□□□□ -2.06
MT-ND4P03905 MTCO1P9-201ENST00000505577 1534 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms