Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.82□□□□□ -2.12
COL4A1P02462 MIR449C-201ENST00000516047 92 ntBASIC1.82□□□□□ -2.12
COL4A1P02462 RNA5SP364-201ENST00000516938 78 ntBASIC1.82□□□□□ -2.12
COL4A1P02462 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.82□□□□□ -2.12
COL4A1P02462 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.82□□□□□ -2.12
COL4A1P02462 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.82□□□□□ -2.12
COL4A1P02462 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.82□□□□□ -2.12
COL4A1P02462 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.82□□□□□ -2.12
COL4A1P02462 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.82□□□□□ -2.12
COL4A1P02462 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.82□□□□□ -2.12
COL4A1P02462 AC115085.1-201ENST00000588924 229 ntBASIC1.82□□□□□ -2.12
COL4A1P02462 AC079610.2-201ENST00000604818 690 ntBASIC1.82□□□□□ -2.12
COL4A1P02462 AC021851.1-201ENST00000608537 1082 ntBASIC1.82□□□□□ -2.12
COL4A1P02462 AL118556.2-201ENST00000614375 824 ntBASIC1.82□□□□□ -2.12
COL4A1P02462 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
COL4A1P02462 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.82□□□□□ -2.12
COL4A1P02462 AC107308.1-201ENST00000615897 301 ntBASIC1.82□□□□□ -2.12
COL4A1P02462 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
COL4A1P02462 MTND5P35-201ENST00000557537 1720 ntBASIC1.82□□□□□ -2.12
COL4A1P02462 MIR153-1-201ENST00000384914 90 ntBASIC1.81□□□□□ -2.12
COL4A1P02462 ZNF33CP-201ENST00000432492 2030 ntBASIC1.81□□□□□ -2.12
COL4A1P02462 AL137159.1-201ENST00000452808 512 ntBASIC1.81□□□□□ -2.12
COL4A1P02462 AIG1P1-201ENST00000503376 148 ntBASIC1.81□□□□□ -2.12
COL4A1P02462 MTCYBP37-201ENST00000510642 1133 ntBASIC1.81□□□□□ -2.12
COL4A1P02462 AC027338.1-201ENST00000514840 825 ntBASIC1.81□□□□□ -2.12
COL4A1P02462 RNU6-1102P-201ENST00000516149 96 ntBASIC1.81□□□□□ -2.12
COL4A1P02462 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.81□□□□□ -2.12
COL4A1P02462 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.81□□□□□ -2.12
COL4A1P02462 AC095057.3-201ENST00000567102 1157 ntBASIC1.81□□□□□ -2.12
COL4A1P02462 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.81□□□□□ -2.12
COL4A1P02462 SNORD53B-201ENST00000577887 78 ntBASIC1.81□□□□□ -2.12
COL4A1P02462 MIR4446-201ENST00000578505 67 ntBASIC1.81□□□□□ -2.12
COL4A1P02462 KATNBL1P5-201ENST00000605015 517 ntBASIC1.81□□□□□ -2.12
COL4A1P02462 AC019159.1-201ENST00000605094 187 ntBASIC1.81□□□□□ -2.12
COL4A1P02462 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.81□□□□□ -2.12
COL4A1P02462 U6.107-201ENST00000637108 79 ntBASIC1.81□□□□□ -2.12
COL4A1P02462 AL163152.1-201ENST00000642001 374 ntBASIC1.81□□□□□ -2.12
COL4A1P02462 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL4A1P02462 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.81□□□□□ -2.12
COL4A1P02462 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL4A1P02462 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL4A1P02462 Z85995.1-201ENST00000415547 335 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.8□□□□□ -2.12
COL4A1P02462 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A1P02462 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A1P02462 RSL24D1P8-201ENST00000434442 492 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 RPL7P29-201ENST00000437151 728 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A1P02462 OR10R1P-201ENST00000441524 1141 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 RPL23AP33-201ENST00000442301 452 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 SSXP4-201ENST00000451349 245 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 TOMM22P6-201ENST00000465035 409 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.8□□□□□ -2.12
COL4A1P02462 OR5H4P-201ENST00000510851 923 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A1P02462 AC083923.1-201ENST00000523708 376 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 OR8K2P-201ENST00000524645 927 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A1P02462 LINC00557-201ENST00000563184 1279 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.8□□□□□ -2.12
COL4A1P02462 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
COL4A1P02462 AL163051.2-201ENST00000618976 735 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.8□□□□□ -2.12
COL4A1P02462 AL136164.4-201ENST00000625013 2135 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 BX649567.1-201ENST00000642071 1134 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
COL4A1P02462 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL4A1P02462 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL4A1P02462 AC233981.2-201ENST00000611524 1614 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL4A1P02462 LINC01347-201ENST00000417964 355 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 AL451074.3-201ENST00000437709 472 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.8□□□□□ -2.12
COL4A1P02462 RNU1-123P-201ENST00000458950 160 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
COL4A1P02462 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.8□□□□□ -2.12
COL4A1P02462 RNU1-61P-201ENST00000516107 151 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 SNORD59.2-201ENST00000516873 68 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A1P02462 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A1P02462 AF279873.1-201ENST00000523393 313 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 SNRPGP1-201ENST00000553864 222 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 DNAJC8P1-201ENST00000554535 372 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A1P02462 AL354943.1-201ENST00000572103 781 ntBASIC1.8□□□□□ -2.12
COL4A1P02462 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.8□□□□□ -2.12
COL4A1P02462 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A1P02462 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
COL4A1P02462 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL4A1P02462 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.79□□□□□ -2.12
COL4A1P02462 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.79□□□□□ -2.12
COL4A1P02462 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
COL4A1P02462 RNA5SP363-201ENST00000365072 115 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 MIR613-201ENST00000385248 95 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 RPL23AP29-201ENST00000397284 453 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.79□□□□□ -2.12
COL4A1P02462 RNA5SP492-201ENST00000411330 114 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.79□□□□□ -2.12
COL4A1P02462 FAM204CP-201ENST00000424489 642 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms