Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 OR7K1P-201ENST00000546439 926 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 ACTR3BP3-201ENST00000565577 979 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 UBE2L4-201ENST00000587688 464 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 NUTF2P8-201ENST00000604593 363 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AC100793.4-201ENST00000613683 429 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AC138932.5-201ENST00000617759 563 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 MIR7975-201ENST00000619350 68 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AL391262.2-201ENST00000622466 494 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AL158801.5-201ENST00000623123 465 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AL356596.1-201ENST00000624230 379 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 AC099063.3-201ENST00000642066 185 ntBASIC2.12□□□□□ -2.07
HLA-DQA1P01909 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HLA-DQA1P01909 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 SNORA63.1-201ENST00000362493 131 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 SNORA38.1-201ENST00000364172 131 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 RNU6-853P-201ENST00000364306 107 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 SNORA23-201ENST00000365128 182 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 RNVU1-14-201ENST00000384770 164 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 RNA5SP181-201ENST00000410246 98 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 MTCO2P21-201ENST00000419780 677 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AL158156.1-201ENST00000422509 473 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AL513043.1-201ENST00000439124 535 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AP000542.1-201ENST00000448473 371 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 MTND2P24-201ENST00000453434 806 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 snoU13.28-201ENST00000459235 104 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 SETP11-201ENST00000473027 690 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AC109925.1-201ENST00000478069 331 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 LARP1BP2-201ENST00000486594 519 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 RNU6-415P-201ENST00000516252 97 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 UBTFL10-201ENST00000528532 562 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 DUXAP1-201ENST00000556632 463 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AGGF1P5-201ENST00000567900 919 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 MIR5680-201ENST00000577577 84 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 VN1R82P-201ENST00000601481 356 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AC005046.1-201ENST00000608515 625 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AC019226.1-201ENST00000625666 515 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 AC006927.4-201ENST00000639187 543 ntBASIC2.11□□□□□ -2.07
HLA-DQA1P01909 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HLA-DQA1P01909 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AL672167.1-206ENST00000356293 943 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 RNU6-462P-201ENST00000362659 105 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 RNU6-433P-201ENST00000363216 104 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 RNU6-799P-201ENST00000363567 107 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 SNORA7.4-201ENST00000384249 137 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 RNA5SP171-201ENST00000391071 115 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 RNU6-754P-201ENST00000391166 107 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 MIR1290-201ENST00000408735 78 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 RNU6-516P-201ENST00000411381 104 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 RPS3AP25-201ENST00000411660 793 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AL008987.1-201ENST00000415528 237 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AC083875.1-201ENST00000419509 405 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AL389915.1-201ENST00000422463 466 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AC091390.3-201ENST00000426478 338 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AL451062.2-201ENST00000427515 271 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AC005326.1-201ENST00000429197 123 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 MTND1P32-201ENST00000433043 938 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 CR769767.1-201ENST00000436337 346 ntBASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.1□□□□□ -2.07
HLA-DQA1P01909 ATG12P2-201ENST00000456830 416 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms