Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RPL31P58-201ENST00000469001 379 ntBASIC0.6□□□□□ -2.31
USH2AO75445 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC0.6□□□□□ -2.31
USH2AO75445 OR6C7P-201ENST00000547875 934 ntBASIC0.6□□□□□ -2.31
USH2AO75445 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC0.6□□□□□ -2.31
USH2AO75445 AL512283.1-201ENST00000606756 1384 ntBASIC0.6□□□□□ -2.31
USH2AO75445 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
USH2AO75445 MIR1304-201ENST00000408243 91 ntBASIC0.6□□□□□ -2.31
USH2AO75445 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.6□□□□□ -2.31
USH2AO75445 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.6□□□□□ -2.31
USH2AO75445 MTCYBP45-201ENST00000435243 565 ntBASIC0.6□□□□□ -2.31
USH2AO75445 AC004022.1-201ENST00000447766 1066 ntBASIC0.6□□□□□ -2.31
USH2AO75445 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC0.6□□□□□ -2.31
USH2AO75445 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
USH2AO75445 TRAV31-201ENST00000502780 342 ntBASIC0.6□□□□□ -2.31
USH2AO75445 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC0.6□□□□□ -2.31
USH2AO75445 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC0.6□□□□□ -2.31
USH2AO75445 MTND5P10-201ENST00000603719 1809 ntBASIC0.6□□□□□ -2.31
USH2AO75445 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
USH2AO75445 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC0.6□□□□□ -2.31
USH2AO75445 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.6□□□□□ -2.31
USH2AO75445 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC0.6□□□□□ -2.31
USH2AO75445 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
USH2AO75445 DEFB108F-201ENST00000344638 222 ntBASIC0.6□□□□□ -2.31
USH2AO75445 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.6□□□□□ -2.31
USH2AO75445 RNA5SP285-201ENST00000516619 119 ntBASIC0.6□□□□□ -2.31
USH2AO75445 HMGN1P28-201ENST00000521340 364 ntBASIC0.6□□□□□ -2.31
USH2AO75445 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC0.6□□□□□ -2.31
USH2AO75445 APOOP3-201ENST00000536787 586 ntBASIC0.6□□□□□ -2.31
USH2AO75445 AL132857.1-201ENST00000555180 708 ntBASIC0.6□□□□□ -2.31
USH2AO75445 AC084373.1-201ENST00000603311 235 ntBASIC0.6□□□□□ -2.31
USH2AO75445 RNU6-39P-201ENST00000384344 107 ntBASIC0.59□□□□□ -2.31
USH2AO75445 SNRPEP2-201ENST00000397592 279 ntBASIC0.59□□□□□ -2.31
USH2AO75445 NDUFS5P3-201ENST00000450668 321 ntBASIC0.59□□□□□ -2.31
USH2AO75445 RGS5-217ENST00000451759 835 ntTSL 3 BASIC0.59□□□□□ -2.31
USH2AO75445 AC006483.1-201ENST00000487308 313 ntBASIC0.59□□□□□ -2.31
USH2AO75445 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.59□□□□□ -2.31
USH2AO75445 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC0.59□□□□□ -2.31
USH2AO75445 AC139103.1-201ENST00000534696 1030 ntBASIC0.59□□□□□ -2.31
USH2AO75445 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC0.59□□□□□ -2.31
USH2AO75445 VN1R79P-201ENST00000593540 513 ntBASIC0.59□□□□□ -2.31
USH2AO75445 AL137072.1-201ENST00000603444 466 ntBASIC0.59□□□□□ -2.31
USH2AO75445 HMGN1P14-201ENST00000412459 517 ntBASIC0.59□□□□□ -2.31
USH2AO75445 HMGB3P31-201ENST00000413333 595 ntBASIC0.59□□□□□ -2.31
USH2AO75445 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.59□□□□□ -2.31
USH2AO75445 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC0.59□□□□□ -2.31
USH2AO75445 HMGN2P38-201ENST00000423806 265 ntBASIC0.59□□□□□ -2.31
USH2AO75445 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.59□□□□□ -2.31
USH2AO75445 AC090255.1-201ENST00000495779 349 ntBASIC0.59□□□□□ -2.31
USH2AO75445 MTCYBP35-201ENST00000503630 1137 ntBASIC0.59□□□□□ -2.31
USH2AO75445 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC0.59□□□□□ -2.32
USH2AO75445 RNU4-31P-201ENST00000384211 141 ntBASIC0.59□□□□□ -2.32
USH2AO75445 RNU6ATAC16P-201ENST00000408591 138 ntBASIC0.59□□□□□ -2.32
USH2AO75445 AC000111.3-201ENST00000433478 193 ntBASIC0.59□□□□□ -2.32
USH2AO75445 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.59□□□□□ -2.32
USH2AO75445 RPL26P9-201ENST00000457466 433 ntBASIC0.59□□□□□ -2.32
USH2AO75445 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC0.59□□□□□ -2.32
USH2AO75445 KATNBL1P1-201ENST00000605192 748 ntBASIC0.59□□□□□ -2.32
USH2AO75445 5S_rRNA.12-201ENST00000617631 107 ntBASIC0.59□□□□□ -2.32
USH2AO75445 MIR6513-201ENST00000621188 64 ntBASIC0.59□□□□□ -2.32
USH2AO75445 AC091925.1-201ENST00000623204 462 ntBASIC0.59□□□□□ -2.32
USH2AO75445 AC138649.5-201ENST00000637456 137 ntBASIC0.59□□□□□ -2.32
USH2AO75445 MIR6759-201ENST00000638110 65 ntBASIC0.59□□□□□ -2.32
USH2AO75445 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
USH2AO75445 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
USH2AO75445 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.59□□□□□ -2.32
USH2AO75445 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC0.59□□□□□ -2.32
USH2AO75445 MIR4711-201ENST00000578274 70 ntBASIC0.59□□□□□ -2.32
USH2AO75445 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC0.59□□□□□ -2.32
USH2AO75445 AC099778.2-201ENST00000610904 211 ntBASIC0.59□□□□□ -2.32
USH2AO75445 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.59□□□□□ -2.32
USH2AO75445 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
USH2AO75445 CR382285.2-201ENST00000624662 1495 ntBASIC0.58□□□□□ -2.32
USH2AO75445 AC016769.3-201ENST00000396562 315 ntBASIC0.58□□□□□ -2.32
USH2AO75445 HMGB1P13-201ENST00000406019 642 ntBASIC0.58□□□□□ -2.32
USH2AO75445 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.58□□□□□ -2.32
USH2AO75445 Y_RNA.644-201ENST00000459006 113 ntBASIC0.58□□□□□ -2.32
USH2AO75445 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC0.58□□□□□ -2.32
USH2AO75445 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
USH2AO75445 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
USH2AO75445 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
USH2AO75445 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
USH2AO75445 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.58□□□□□ -2.32
USH2AO75445 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
USH2AO75445 Y_RNA.610-201ENST00000410681 103 ntBASIC0.58□□□□□ -2.32
USH2AO75445 MTND1P23-201ENST00000416931 372 ntBASIC0.58□□□□□ -2.32
USH2AO75445 AL353718.1-201ENST00000451028 517 ntBASIC0.58□□□□□ -2.32
USH2AO75445 GOLGA5P1-201ENST00000507317 980 ntBASIC0.58□□□□□ -2.32
USH2AO75445 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.58□□□□□ -2.32
USH2AO75445 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.58□□□□□ -2.32
USH2AO75445 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC0.58□□□□□ -2.32
USH2AO75445 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC0.58□□□□□ -2.32
USH2AO75445 SNORA18.2-201ENST00000383865 132 ntBASIC0.58□□□□□ -2.32
USH2AO75445 Y_RNA.572-201ENST00000384757 98 ntBASIC0.58□□□□□ -2.32
USH2AO75445 AC019070.1-201ENST00000415008 1024 ntBASIC0.58□□□□□ -2.32
USH2AO75445 Z85995.1-201ENST00000415547 335 ntBASIC0.58□□□□□ -2.32
USH2AO75445 LINC01347-201ENST00000417964 355 ntBASIC0.58□□□□□ -2.32
USH2AO75445 Z85994.2-201ENST00000434327 452 ntBASIC0.58□□□□□ -2.32
USH2AO75445 USP9YP7-201ENST00000436723 430 ntBASIC0.58□□□□□ -2.32
USH2AO75445 AL031663.1-201ENST00000437445 219 ntBASIC0.58□□□□□ -2.32
USH2AO75445 USP9YP32-201ENST00000452432 430 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms