Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CACNA1FO60840 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CACNA1FO60840 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CACNA1FO60840 AL079343.1-201ENST00000572358 1771 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 SNORD62.1-201ENST00000362541 86 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 RNY3P10-201ENST00000384764 102 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CACNA1FO60840 AL590004.2-201ENST00000404787 371 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AL133264.1-201ENST00000407157 562 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 RNA5SP129-201ENST00000410276 118 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.32□□□□□ -1.88
CACNA1FO60840 MTND4LP11-201ENST00000422184 280 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AC063976.3-201ENST00000426849 329 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 ZYG11AP1-201ENST00000430329 837 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AC244505.4-201ENST00000434905 287 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 MTND1P4-201ENST00000435196 415 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 SSXP5-201ENST00000443473 287 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 MTATP6P30-201ENST00000443540 664 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 COX6CP2-201ENST00000444980 225 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 BX248409.1-201ENST00000455497 255 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 SNRPGP9-201ENST00000456025 225 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.32□□□□□ -1.88
CACNA1FO60840 SNORD42A-201ENST00000459584 64 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 RPL31P13-201ENST00000484151 370 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AC109464.2-201ENST00000510242 943 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 SLC2A13P1-201ENST00000531560 322 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 ZNF519P3-201ENST00000557158 1032 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AC027176.1-201ENST00000560204 514 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AC090751.1-201ENST00000566966 267 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.32□□□□□ -1.88
CACNA1FO60840 AC012065.4-201ENST00000602445 679 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 NRBF2P5-201ENST00000603087 788 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AC090186.1-201ENST00000605991 572 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AC107294.3-201ENST00000609211 526 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CACNA1FO60840 MIR6733-201ENST00000635723 61 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AC099654.12-201ENST00000639868 649 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CACNA1FO60840 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.32□□□□□ -1.88
CACNA1FO60840 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CACNA1FO60840 AC092447.7-201ENST00000422212 1621 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AC022031.1-201ENST00000585985 2593 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CACNA1FO60840 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CACNA1FO60840 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CACNA1FO60840 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
CACNA1FO60840 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CACNA1FO60840 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CACNA1FO60840 RNU6-931P-201ENST00000363850 107 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 RNA5SP68-201ENST00000363885 119 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 RNU6-259P-201ENST00000383999 107 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 MTND4LP20-201ENST00000402379 270 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AC069218.2-201ENST00000411665 344 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.32□□□□□ -1.88
CACNA1FO60840 MTND1P2-201ENST00000430604 821 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.32□□□□□ -1.88
CACNA1FO60840 RPL36AP33-201ENST00000450395 310 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.32□□□□□ -1.88
CACNA1FO60840 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.32□□□□□ -1.88
CACNA1FO60840 RNU6-1225P-201ENST00000516336 65 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 MTND4LP26-201ENST00000518144 282 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.32□□□□□ -1.88
CACNA1FO60840 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.32□□□□□ -1.88
CACNA1FO60840 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.32□□□□□ -1.88
CACNA1FO60840 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.32□□□□□ -1.88
CACNA1FO60840 AC068944.2-201ENST00000610373 403 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 uc_338.9-201ENST00000617424 182 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 DCAF13P1-201ENST00000495256 1330 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.32□□□□□ -1.88
CACNA1FO60840 AL365361.1-201ENST00000566942 3481 ntBASIC3.32□□□□□ -1.88
CACNA1FO60840 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CACNA1FO60840 TEX21P-201ENST00000447107 1476 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
CACNA1FO60840 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CACNA1FO60840 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CACNA1FO60840 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.31□□□□□ -1.88
CACNA1FO60840 AC068533.2-201ENST00000411872 306 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 NDUFB4P5-201ENST00000415445 361 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 CYCSP46-201ENST00000423569 204 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AC012498.1-201ENST00000424037 437 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.31□□□□□ -1.88
CACNA1FO60840 UBE2FP3-201ENST00000436366 524 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CACNA1FO60840 RPS7P5-201ENST00000441482 581 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 EPS15P1-201ENST00000448836 336 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AC108938.1-201ENST00000451204 136 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.31□□□□□ -1.88
CACNA1FO60840 RNU6-885P-201ENST00000516607 104 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.31□□□□□ -1.88
CACNA1FO60840 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.31□□□□□ -1.88
CACNA1FO60840 AL845331.3-202ENST00000562856 261 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.31□□□□□ -1.88
CACNA1FO60840 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.31□□□□□ -1.88
CACNA1FO60840 AC027807.2-201ENST00000616099 408 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AL713922.2-201ENST00000619384 716 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AL356266.1-201ENST00000623311 483 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AC231657.1-201ENST00000624313 397 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.31□□□□□ -1.88
CACNA1FO60840 MTND5P27-201ENST00000428871 1720 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms