Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.35□□□□□ -2.19
URB1O60287 TRBV8-1-201ENST00000481590 279 ntBASIC1.35□□□□□ -2.19
URB1O60287 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
URB1O60287 AL359273.1-201ENST00000510918 627 ntBASIC1.35□□□□□ -2.19
URB1O60287 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.35□□□□□ -2.19
URB1O60287 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.35□□□□□ -2.19
URB1O60287 AL713998.2-201ENST00000604538 1198 ntBASIC1.35□□□□□ -2.19
URB1O60287 AC008083.4-201ENST00000615076 444 ntBASIC1.35□□□□□ -2.19
URB1O60287 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
URB1O60287 AC080100.1-201ENST00000624239 5356 ntBASIC1.34□□□□□ -2.19
URB1O60287 CDC27P3-201ENST00000635418 1910 ntBASIC1.34□□□□□ -2.19
URB1O60287 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
URB1O60287 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
URB1O60287 RPS12P24-201ENST00000412619 387 ntBASIC1.34□□□□□ -2.2
URB1O60287 RPL17P49-201ENST00000443728 411 ntBASIC1.34□□□□□ -2.2
URB1O60287 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.34□□□□□ -2.2
URB1O60287 AC008885.2-201ENST00000509506 930 ntBASIC1.34□□□□□ -2.2
URB1O60287 RPPH1-2P-201ENST00000516688 293 ntBASIC1.34□□□□□ -2.2
URB1O60287 AL138976.2-201ENST00000563989 694 ntBASIC1.34□□□□□ -2.2
URB1O60287 MTATP6P3-201ENST00000581686 676 ntBASIC1.34□□□□□ -2.2
URB1O60287 AC098679.5-201ENST00000624394 571 ntBASIC1.34□□□□□ -2.2
URB1O60287 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.34□□□□□ -2.2
URB1O60287 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.34□□□□□ -2.2
URB1O60287 RPS26P56-201ENST00000444468 240 ntBASIC1.33□□□□□ -2.2
URB1O60287 Z96811.1-201ENST00000445880 108 ntBASIC1.33□□□□□ -2.2
URB1O60287 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.33□□□□□ -2.2
URB1O60287 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.33□□□□□ -2.2
URB1O60287 AP000907.2-201ENST00000530827 353 ntBASIC1.33□□□□□ -2.2
URB1O60287 AC109635.4-202ENST00000531666 412 ntBASIC1.33□□□□□ -2.2
URB1O60287 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.33□□□□□ -2.2
URB1O60287 OR4K8P-201ENST00000578842 1048 ntBASIC1.33□□□□□ -2.2
URB1O60287 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.33□□□□□ -2.2
URB1O60287 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.33□□□□□ -2.2
URB1O60287 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
URB1O60287 HNRNPDP2-201ENST00000406475 478 ntBASIC1.33□□□□□ -2.2
URB1O60287 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.33□□□□□ -2.2
URB1O60287 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.33□□□□□ -2.2
URB1O60287 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.33□□□□□ -2.2
URB1O60287 MED6P1-201ENST00000439659 713 ntBASIC1.33□□□□□ -2.2
URB1O60287 CALM1P1-201ENST00000442082 433 ntBASIC1.33□□□□□ -2.2
URB1O60287 SSXP4-201ENST00000451349 245 ntBASIC1.33□□□□□ -2.2
URB1O60287 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.33□□□□□ -2.2
URB1O60287 AC022690.1-201ENST00000526681 550 ntBASIC1.33□□□□□ -2.2
URB1O60287 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.33□□□□□ -2.2
URB1O60287 TRAV28-201ENST00000557548 323 ntBASIC1.33□□□□□ -2.2
URB1O60287 AC011712.1-201ENST00000588959 234 ntBASIC1.33□□□□□ -2.2
URB1O60287 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.33□□□□□ -2.2
URB1O60287 AC068944.2-201ENST00000610373 403 ntBASIC1.33□□□□□ -2.2
URB1O60287 AL390240.1-201ENST00000612950 384 ntBASIC1.33□□□□□ -2.2
URB1O60287 RNU6-37P-201ENST00000362692 107 ntBASIC1.32□□□□□ -2.2
URB1O60287 RNU6-11P-201ENST00000364234 107 ntBASIC1.32□□□□□ -2.2
URB1O60287 MIR1304-201ENST00000408243 91 ntBASIC1.32□□□□□ -2.2
URB1O60287 RNU2-32P-201ENST00000411193 191 ntBASIC1.32□□□□□ -2.2
URB1O60287 MORF4L1P7-201ENST00000426038 703 ntBASIC1.32□□□□□ -2.2
URB1O60287 HMGN2P18-201ENST00000450680 270 ntBASIC1.32□□□□□ -2.2
URB1O60287 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.32□□□□□ -2.2
URB1O60287 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.32□□□□□ -2.2
URB1O60287 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.32□□□□□ -2.2
URB1O60287 AC008427.1-201ENST00000503102 655 ntBASIC1.32□□□□□ -2.2
URB1O60287 AC021146.8-201ENST00000507455 733 ntBASIC1.32□□□□□ -2.2
URB1O60287 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.32□□□□□ -2.2
URB1O60287 NPM1P52-201ENST00000518264 846 ntBASIC1.32□□□□□ -2.2
URB1O60287 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.32□□□□□ -2.2
URB1O60287 AC007115.1-201ENST00000546853 234 ntBASIC1.32□□□□□ -2.2
URB1O60287 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
URB1O60287 AL049838.1-201ENST00000563647 981 ntBASIC1.32□□□□□ -2.2
URB1O60287 AC012493.3-201ENST00000604494 112 ntBASIC1.32□□□□□ -2.2
URB1O60287 AL133507.1-201ENST00000605269 557 ntBASIC1.32□□□□□ -2.2
URB1O60287 uc_338.9-201ENST00000617424 182 ntBASIC1.32□□□□□ -2.2
URB1O60287 AC006338.1-201ENST00000618453 749 ntBASIC1.32□□□□□ -2.2
URB1O60287 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.32□□□□□ -2.2
URB1O60287 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.32□□□□□ -2.2
URB1O60287 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
URB1O60287 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
URB1O60287 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
URB1O60287 AL596028.1-201ENST00000326971 197 ntBASIC1.32□□□□□ -2.2
URB1O60287 Y_RNA.178-201ENST00000363832 102 ntBASIC1.32□□□□□ -2.2
URB1O60287 RNU6-1077P-201ENST00000410506 102 ntBASIC1.32□□□□□ -2.2
URB1O60287 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.32□□□□□ -2.2
URB1O60287 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
URB1O60287 MTCYBP18-201ENST00000501056 747 ntBASIC1.32□□□□□ -2.2
URB1O60287 SNORA31.24-201ENST00000517232 57 ntBASIC1.32□□□□□ -2.2
URB1O60287 MIR5000-201ENST00000577717 103 ntBASIC1.32□□□□□ -2.2
URB1O60287 AL391646.1-201ENST00000603860 190 ntBASIC1.32□□□□□ -2.2
URB1O60287 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.32□□□□□ -2.2
URB1O60287 MIR4496-201ENST00000635896 61 ntBASIC1.32□□□□□ -2.2
URB1O60287 Y_RNA.30-201ENST00000362572 97 ntBASIC1.31□□□□□ -2.2
URB1O60287 RNU6-1080P-201ENST00000383982 107 ntBASIC1.31□□□□□ -2.2
URB1O60287 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.31□□□□□ -2.2
URB1O60287 MTND1P23-201ENST00000416931 372 ntBASIC1.31□□□□□ -2.2
URB1O60287 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.31□□□□□ -2.2
URB1O60287 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.31□□□□□ -2.2
URB1O60287 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
URB1O60287 LSM1P1-201ENST00000438629 273 ntBASIC1.31□□□□□ -2.2
URB1O60287 RPL23AP33-201ENST00000442301 452 ntBASIC1.31□□□□□ -2.2
URB1O60287 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
URB1O60287 AL139109.1-201ENST00000455491 297 ntBASIC1.31□□□□□ -2.2
URB1O60287 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
URB1O60287 AC022634.1-201ENST00000520765 532 ntBASIC1.31□□□□□ -2.2
URB1O60287 OR5AQ1P-201ENST00000527596 927 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms