Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.23□□□□□ -1.89
PRKNO60260 AC114967.1-201ENST00000504890 259 ntBASIC3.23□□□□□ -1.89
PRKNO60260 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.23□□□□□ -1.89
PRKNO60260 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.23□□□□□ -1.89
PRKNO60260 Vault.3-201ENST00000516676 95 ntBASIC3.23□□□□□ -1.89
PRKNO60260 AC124947.2-202ENST00000552735 133 ntBASIC3.23□□□□□ -1.89
PRKNO60260 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.23□□□□□ -1.89
PRKNO60260 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.23□□□□□ -1.89
PRKNO60260 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.23□□□□□ -1.89
PRKNO60260 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.23□□□□□ -1.89
PRKNO60260 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.23□□□□□ -1.89
PRKNO60260 AC010928.3-201ENST00000587712 541 ntBASIC3.23□□□□□ -1.89
PRKNO60260 AL158211.4-201ENST00000606988 584 ntBASIC3.23□□□□□ -1.89
PRKNO60260 AC090970.3-201ENST00000612566 866 ntBASIC3.23□□□□□ -1.89
PRKNO60260 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.23□□□□□ -1.89
PRKNO60260 CR381653.2-201ENST00000624041 768 ntBASIC3.23□□□□□ -1.89
PRKNO60260 AC124864.2-201ENST00000624736 186 ntBASIC3.23□□□□□ -1.89
PRKNO60260 AL157786.1-207ENST00000627771 695 ntBASIC3.23□□□□□ -1.89
PRKNO60260 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.23□□□□□ -1.89
PRKNO60260 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.23□□□□□ -1.89
PRKNO60260 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.23□□□□□ -1.89
PRKNO60260 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PRKNO60260 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.23□□□□□ -1.89
PRKNO60260 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PRKNO60260 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.23□□□□□ -1.89
PRKNO60260 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.23□□□□□ -1.89
PRKNO60260 GABPAP-201ENST00000419271 1356 ntBASIC3.23□□□□□ -1.89
PRKNO60260 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.22□□□□□ -1.89
PRKNO60260 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PRKNO60260 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PRKNO60260 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.22□□□□□ -1.89
PRKNO60260 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.22□□□□□ -1.89
PRKNO60260 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PRKNO60260 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PRKNO60260 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PRKNO60260 RNA5SP197-201ENST00000363357 119 ntBASIC3.22□□□□□ -1.89
PRKNO60260 RNA5SP50-201ENST00000363731 107 ntBASIC3.22□□□□□ -1.89
PRKNO60260 RPL17P50-201ENST00000396131 546 ntBASIC3.22□□□□□ -1.89
PRKNO60260 RNA5SP44-201ENST00000410446 133 ntBASIC3.22□□□□□ -1.89
PRKNO60260 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.22□□□□□ -1.89
PRKNO60260 MTND3P17-201ENST00000416968 344 ntBASIC3.22□□□□□ -1.89
PRKNO60260 EIF1P1-201ENST00000421436 341 ntBASIC3.22□□□□□ -1.89
PRKNO60260 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.22□□□□□ -1.89
PRKNO60260 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.22□□□□□ -1.89
PRKNO60260 AP000907.1-201ENST00000428428 510 ntBASIC3.22□□□□□ -1.89
PRKNO60260 TIMM9P1-201ENST00000436122 256 ntBASIC3.22□□□□□ -1.89
PRKNO60260 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.22□□□□□ -1.89
PRKNO60260 PRSS3P4-201ENST00000453323 162 ntBASIC3.22□□□□□ -1.89
PRKNO60260 AC234775.1-201ENST00000454247 670 ntBASIC3.22□□□□□ -1.89
PRKNO60260 AC007967.1-201ENST00000455422 1159 ntBASIC3.22□□□□□ -1.89
PRKNO60260 AL359385.1-201ENST00000456509 365 ntBASIC3.22□□□□□ -1.89
PRKNO60260 RPL9P32-201ENST00000464118 620 ntBASIC3.22□□□□□ -1.89
PRKNO60260 RN7SL594P-201ENST00000470590 287 ntBASIC3.22□□□□□ -1.89
PRKNO60260 FCF1P3-201ENST00000496394 590 ntBASIC3.22□□□□□ -1.89
PRKNO60260 AC078918.1-201ENST00000498515 228 ntBASIC3.22□□□□□ -1.89
PRKNO60260 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.22□□□□□ -1.89
PRKNO60260 IGKV2-26-201ENST00000518305 343 ntBASIC3.22□□□□□ -1.89
PRKNO60260 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.22□□□□□ -1.89
PRKNO60260 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.22□□□□□ -1.89
PRKNO60260 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.22□□□□□ -1.89
PRKNO60260 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.22□□□□□ -1.89
PRKNO60260 AC026333.2-201ENST00000542164 106 ntBASIC3.22□□□□□ -1.89
PRKNO60260 OR4T1P-201ENST00000554933 911 ntBASIC3.22□□□□□ -1.89
PRKNO60260 AC087481.2-201ENST00000565492 330 ntBASIC3.22□□□□□ -1.89
PRKNO60260 MIR4738-201ENST00000579134 87 ntBASIC3.22□□□□□ -1.89
PRKNO60260 COX6CP3-201ENST00000580869 223 ntBASIC3.22□□□□□ -1.89
PRKNO60260 AP000860.1-201ENST00000605250 559 ntBASIC3.22□□□□□ -1.89
PRKNO60260 AC007038.2-201ENST00000608095 740 ntBASIC3.22□□□□□ -1.89
PRKNO60260 AC068944.2-201ENST00000610373 403 ntBASIC3.22□□□□□ -1.89
PRKNO60260 AL590282.1-201ENST00000610379 1136 ntBASIC3.22□□□□□ -1.89
PRKNO60260 MIR7851-201ENST00000610611 160 ntBASIC3.22□□□□□ -1.89
PRKNO60260 TUG1_1.1-201ENST00000610654 145 ntBASIC3.22□□□□□ -1.89
PRKNO60260 AL592295.2-201ENST00000612578 206 ntBASIC3.22□□□□□ -1.89
PRKNO60260 MIR7975-201ENST00000619350 68 ntBASIC3.22□□□□□ -1.89
PRKNO60260 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.22□□□□□ -1.89
PRKNO60260 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.22□□□□□ -1.89
PRKNO60260 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
PRKNO60260 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PRKNO60260 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PRKNO60260 AC068647.1-201ENST00000489539 2265 ntBASIC3.22□□□□□ -1.89
PRKNO60260 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PRKNO60260 AL157700.1-201ENST00000561973 1432 ntBASIC3.21□□□□□ -1.9
PRKNO60260 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PRKNO60260 OR4G2P-201ENST00000328113 903 ntBASIC3.21□□□□□ -1.9
PRKNO60260 RNU5A-8P-201ENST00000364102 114 ntBASIC3.21□□□□□ -1.9
PRKNO60260 RNU6-282P-201ENST00000365357 103 ntBASIC3.21□□□□□ -1.9
PRKNO60260 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PRKNO60260 Y_RNA.554-201ENST00000384672 102 ntBASIC3.21□□□□□ -1.9
PRKNO60260 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PRKNO60260 RNU4-55P-201ENST00000410731 137 ntBASIC3.21□□□□□ -1.9
PRKNO60260 RNU6-516P-201ENST00000411381 104 ntBASIC3.21□□□□□ -1.9
PRKNO60260 HMGN1P24-201ENST00000412282 298 ntBASIC3.21□□□□□ -1.9
PRKNO60260 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.21□□□□□ -1.9
PRKNO60260 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.21□□□□□ -1.9
PRKNO60260 ELOCP4-201ENST00000420090 333 ntBASIC3.21□□□□□ -1.9
PRKNO60260 AL137014.1-201ENST00000420490 1226 ntBASIC3.21□□□□□ -1.9
PRKNO60260 MTCYBP5-201ENST00000423752 1135 ntBASIC3.21□□□□□ -1.9
PRKNO60260 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.21□□□□□ -1.9
PRKNO60260 ISCA1P1-201ENST00000426679 387 ntBASIC3.21□□□□□ -1.9
PRKNO60260 AC006989.1-201ENST00000427212 131 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms