Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MIR483-201ENST00000385070 76 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 MCTS2P-201ENST00000394552 546 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 SSXP10-201ENST00000402595 565 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 AL512604.1-201ENST00000404812 257 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.3□□□□□ -2.2
SSSCA1O60232 TATDN1P1-201ENST00000414123 891 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 CYCSP48-201ENST00000417124 323 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.3□□□□□ -2.2
SSSCA1O60232 AC006946.1-201ENST00000429106 328 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.3□□□□□ -2.2
SSSCA1O60232 HSPE1P21-201ENST00000438283 308 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 AL714022.1-201ENST00000439897 151 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.3□□□□□ -2.2
SSSCA1O60232 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.3□□□□□ -2.2
SSSCA1O60232 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.3□□□□□ -2.2
SSSCA1O60232 EEF1B2P7-201ENST00000451177 676 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 Z82190.1-201ENST00000454534 490 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.3□□□□□ -2.2
SSSCA1O60232 AC116337.2-201ENST00000477662 156 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 AC023790.1-201ENST00000482174 347 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 AC069528.1-202ENST00000482888 637 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 AC026801.1-201ENST00000497178 464 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 AC109471.1-201ENST00000511631 612 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 AC108043.1-201ENST00000512696 574 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.3□□□□□ -2.2
SSSCA1O60232 HSPE1P18-201ENST00000517602 280 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.3□□□□□ -2.2
SSSCA1O60232 EIF4EP5-201ENST00000528228 640 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.3□□□□□ -2.2
SSSCA1O60232 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.3□□□□□ -2.2
SSSCA1O60232 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.3□□□□□ -2.2
SSSCA1O60232 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.3□□□□□ -2.2
SSSCA1O60232 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.3□□□□□ -2.2
SSSCA1O60232 BNIP3P33-201ENST00000598912 569 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 AC002487.1-201ENST00000604565 994 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 uc_338.5-201ENST00000611839 155 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SSSCA1O60232 IGHVIII-44-202ENST00000636235 289 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 MTND2P41-201ENST00000637599 773 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 MKKS-204ENST00000639674 192 ntBASIC1.3□□□□□ -2.2
SSSCA1O60232 AC130650.2-201ENST00000618736 2403 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
SSSCA1O60232 AC080128.1-201ENST00000474389 1917 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 RNA5SP276-201ENST00000362580 94 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.29□□□□□ -2.2
SSSCA1O60232 RNU4-31P-201ENST00000384211 141 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 Z85995.1-201ENST00000415547 335 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.29□□□□□ -2.2
SSSCA1O60232 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.29□□□□□ -2.2
SSSCA1O60232 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.29□□□□□ -2.2
SSSCA1O60232 GTF2IP20-201ENST00000431663 360 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.29□□□□□ -2.2
SSSCA1O60232 AL360221.1-201ENST00000445989 335 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 AC005297.2-201ENST00000450430 606 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 RNU1-98P-201ENST00000458992 160 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 RPL30P9-201ENST00000465586 330 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.29□□□□□ -2.2
SSSCA1O60232 AC104685.1-201ENST00000502445 371 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 AC092436.1-201ENST00000506450 503 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 SLC25A15P5-201ENST00000508033 253 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 AC096745.1-201ENST00000509945 370 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 SNORA31.13-201ENST00000516624 135 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.29□□□□□ -2.2
SSSCA1O60232 AP002770.2-201ENST00000543613 532 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.29□□□□□ -2.2
SSSCA1O60232 AC023158.1-201ENST00000561632 1025 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SSSCA1O60232 AC078899.2-201ENST00000595282 212 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 AC126118.1-201ENST00000607744 628 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SSSCA1O60232 AC084768.2-201ENST00000622736 221 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.29□□□□□ -2.2
SSSCA1O60232 ZNF876P-202ENST00000398732 1485 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 OR4G2P-202ENST00000641004 1759 ntBASIC1.29□□□□□ -2.2
SSSCA1O60232 AP000648.3-201ENST00000623539 4507 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.28□□□□□ -2.2
SSSCA1O60232 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SSSCA1O60232 RNU6-270P-201ENST00000364131 105 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 RNU6-253P-201ENST00000384730 105 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 MIR320A-201ENST00000385302 82 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 MIR1303-201ENST00000408625 86 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 AL161449.1-201ENST00000414531 1199 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 OR4K6P-201ENST00000416478 897 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.28□□□□□ -2.2
SSSCA1O60232 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 AC099677.1-201ENST00000420575 175 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 AC234781.2-201ENST00000426370 994 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.28□□□□□ -2.2
SSSCA1O60232 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.28□□□□□ -2.2
SSSCA1O60232 Z80107.1-201ENST00000436830 412 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 AL353689.1-201ENST00000438895 199 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.28□□□□□ -2.2
SSSCA1O60232 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
SSSCA1O60232 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.28□□□□□ -2.2
SSSCA1O60232 RNU6-928P-201ENST00000516876 104 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 AC087276.1-201ENST00000529659 480 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 EIF5A2P1-201ENST00000564027 460 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 AC068135.2-201ENST00000569293 1028 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms