Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSX4O60224 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSX4O60224 MIR493-201ENST00000385254 89 ntBASIC3.25□□□□□ -1.89
SSX4O60224 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SSX4O60224 TXNP7-201ENST00000406296 293 ntBASIC3.25□□□□□ -1.89
SSX4O60224 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.25□□□□□ -1.89
SSX4O60224 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.25□□□□□ -1.89
SSX4O60224 AL589872.1-201ENST00000426602 288 ntBASIC3.25□□□□□ -1.89
SSX4O60224 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.25□□□□□ -1.89
SSX4O60224 AP000907.1-201ENST00000428428 510 ntBASIC3.25□□□□□ -1.89
SSX4O60224 HSPD1P21-201ENST00000436541 245 ntBASIC3.25□□□□□ -1.89
SSX4O60224 SNORA71B-202ENST00000439232 272 ntBASIC3.25□□□□□ -1.89
SSX4O60224 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.25□□□□□ -1.89
SSX4O60224 RPS23P3-201ENST00000470993 430 ntBASIC3.25□□□□□ -1.89
SSX4O60224 RPL31P60-201ENST00000478450 367 ntBASIC3.25□□□□□ -1.89
SSX4O60224 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.25□□□□□ -1.89
SSX4O60224 LARP1BP2-201ENST00000486594 519 ntBASIC3.25□□□□□ -1.89
SSX4O60224 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSX4O60224 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.25□□□□□ -1.89
SSX4O60224 AC114797.1-201ENST00000514003 728 ntBASIC3.25□□□□□ -1.89
SSX4O60224 RNU1-61P-201ENST00000516107 151 ntBASIC3.25□□□□□ -1.89
SSX4O60224 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSX4O60224 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.25□□□□□ -1.89
SSX4O60224 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.25□□□□□ -1.89
SSX4O60224 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.25□□□□□ -1.89
SSX4O60224 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.25□□□□□ -1.89
SSX4O60224 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.25□□□□□ -1.89
SSX4O60224 AP005205.1-201ENST00000563503 508 ntBASIC3.25□□□□□ -1.89
SSX4O60224 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.25□□□□□ -1.89
SSX4O60224 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.25□□□□□ -1.89
SSX4O60224 AC040904.1-201ENST00000590850 223 ntBASIC3.25□□□□□ -1.89
SSX4O60224 U3.45-201ENST00000607547 219 ntBASIC3.25□□□□□ -1.89
SSX4O60224 AC103710.1-201ENST00000610003 901 ntBASIC3.25□□□□□ -1.89
SSX4O60224 uc_338.12-201ENST00000616344 181 ntBASIC3.25□□□□□ -1.89
SSX4O60224 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSX4O60224 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.25□□□□□ -1.89
SSX4O60224 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.25□□□□□ -1.89
SSX4O60224 SDAD1P2-201ENST00000441308 2028 ntBASIC3.24□□□□□ -1.89
SSX4O60224 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SSX4O60224 AC005183.1-201ENST00000603687 1979 ntBASIC3.24□□□□□ -1.89
SSX4O60224 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SSX4O60224 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SSX4O60224 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSX4O60224 RNU6-525P-201ENST00000363685 104 ntBASIC3.24□□□□□ -1.89
SSX4O60224 MIR514A1-201ENST00000385133 98 ntBASIC3.24□□□□□ -1.89
SSX4O60224 MRPL42P2-201ENST00000403169 426 ntBASIC3.24□□□□□ -1.89
SSX4O60224 ELOCP17-201ENST00000414751 326 ntBASIC3.24□□□□□ -1.89
SSX4O60224 RPS15AP12-201ENST00000419498 388 ntBASIC3.24□□□□□ -1.89
SSX4O60224 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.24□□□□□ -1.89
SSX4O60224 RPL27AP8-201ENST00000424277 446 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AL353706.1-201ENST00000436728 494 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.24□□□□□ -1.89
SSX4O60224 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX4O60224 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.24□□□□□ -1.89
SSX4O60224 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.24□□□□□ -1.89
SSX4O60224 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.24□□□□□ -1.89
SSX4O60224 AL133162.1-201ENST00000463228 453 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AC010631.1-201ENST00000474150 156 ntBASIC3.24□□□□□ -1.89
SSX4O60224 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.24□□□□□ -1.89
SSX4O60224 RPS4XP22-201ENST00000480755 780 ntBASIC3.24□□□□□ -1.89
SSX4O60224 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.24□□□□□ -1.89
SSX4O60224 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX4O60224 ARL2BPP4-201ENST00000506854 471 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX4O60224 NDUFB4P2-201ENST00000509515 391 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX4O60224 PHBP14-201ENST00000512887 367 ntBASIC3.24□□□□□ -1.89
SSX4O60224 Y_RNA.672-201ENST00000516289 104 ntBASIC3.24□□□□□ -1.89
SSX4O60224 SCARNA14-201ENST00000516903 136 ntBASIC3.24□□□□□ -1.89
SSX4O60224 RNU2-46P-201ENST00000517038 113 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX4O60224 AC093331.1-201ENST00000521474 169 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AP001804.3-201ENST00000525146 880 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX4O60224 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SSX4O60224 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.24□□□□□ -1.89
SSX4O60224 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.24□□□□□ -1.89
SSX4O60224 MIR4293-201ENST00000584305 78 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX4O60224 AL606834.2-201ENST00000602954 668 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AL161756.2-201ENST00000604597 246 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AC064872.1-201ENST00000604823 1072 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AC007179.3-201ENST00000604976 235 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AP000254.1-201ENST00000609934 520 ntBASIC3.24□□□□□ -1.89
SSX4O60224 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AC091304.9-201ENST00000612091 226 ntBASIC3.24□□□□□ -1.89
SSX4O60224 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AP001506.1-201ENST00000615444 211 ntBASIC3.24□□□□□ -1.89
SSX4O60224 AC010133.1-201ENST00000615809 842 ntBASIC3.24□□□□□ -1.89
SSX4O60224 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.24□□□□□ -1.89
SSX4O60224 OR4G2P-202ENST00000641004 1759 ntBASIC3.24□□□□□ -1.89
SSX4O60224 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSX4O60224 MTCO1P12-201ENST00000414273 1543 ntBASIC3.24□□□□□ -1.89
SSX4O60224 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSX4O60224 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.23□□□□□ -1.89
SSX4O60224 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SSX4O60224 GNG5P1-201ENST00000255500 204 ntBASIC3.23□□□□□ -1.89
SSX4O60224 RNA5SP295-201ENST00000362655 121 ntBASIC3.23□□□□□ -1.89
SSX4O60224 U8.3-201ENST00000363321 132 ntBASIC3.23□□□□□ -1.89
SSX4O60224 Y_RNA.201-201ENST00000364052 96 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms