Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.59□□□□□ -1.99
CHMP2AO43633 AC124283.4-201ENST00000581815 456 ntBASIC2.59□□□□□ -1.99
CHMP2AO43633 AC060766.3-201ENST00000591442 263 ntBASIC2.59□□□□□ -1.99
CHMP2AO43633 AL645944.1-201ENST00000603857 493 ntBASIC2.59□□□□□ -1.99
CHMP2AO43633 AP003973.1-201ENST00000604639 691 ntBASIC2.59□□□□□ -1.99
CHMP2AO43633 AC024560.3-201ENST00000608482 349 ntBASIC2.59□□□□□ -1.99
CHMP2AO43633 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.59□□□□□ -1.99
CHMP2AO43633 VN1R74P-201ENST00000613259 503 ntBASIC2.59□□□□□ -1.99
CHMP2AO43633 AC090132.2-201ENST00000615881 347 ntBASIC2.59□□□□□ -1.99
CHMP2AO43633 AC009159.1-201ENST00000618386 642 ntBASIC2.59□□□□□ -1.99
CHMP2AO43633 AC068880.4-201ENST00000623082 495 ntBASIC2.59□□□□□ -1.99
CHMP2AO43633 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
CHMP2AO43633 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHMP2AO43633 RNU6-492P-201ENST00000363035 104 ntBASIC2.58□□□□□ -2
CHMP2AO43633 RNU1-105P-201ENST00000363470 161 ntBASIC2.58□□□□□ -2
CHMP2AO43633 U3.20-201ENST00000390909 217 ntBASIC2.58□□□□□ -2
CHMP2AO43633 SNORA40.4-201ENST00000390971 128 ntBASIC2.58□□□□□ -2
CHMP2AO43633 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.58□□□□□ -2
CHMP2AO43633 Z98742.3-201ENST00000418637 326 ntBASIC2.58□□□□□ -2
CHMP2AO43633 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.58□□□□□ -2
CHMP2AO43633 RPS15AP7-201ENST00000439294 405 ntBASIC2.58□□□□□ -2
CHMP2AO43633 AL714022.1-201ENST00000439897 151 ntBASIC2.58□□□□□ -2
CHMP2AO43633 AL121871.1-201ENST00000443413 436 ntBASIC2.58□□□□□ -2
CHMP2AO43633 DDX3P2-201ENST00000446138 111 ntBASIC2.58□□□□□ -2
CHMP2AO43633 AC116337.2-201ENST00000477662 156 ntBASIC2.58□□□□□ -2
CHMP2AO43633 RPL23AP49-201ENST00000492925 468 ntBASIC2.58□□□□□ -2
CHMP2AO43633 RNU5A-7P-201ENST00000515979 116 ntBASIC2.58□□□□□ -2
CHMP2AO43633 AP003066.2-201ENST00000529375 555 ntBASIC2.58□□□□□ -2
CHMP2AO43633 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.58□□□□□ -2
CHMP2AO43633 GLYCAM1-201ENST00000546596 285 ntBASIC2.58□□□□□ -2
CHMP2AO43633 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.58□□□□□ -2
CHMP2AO43633 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.58□□□□□ -2
CHMP2AO43633 HMGB1P14-201ENST00000557424 591 ntBASIC2.58□□□□□ -2
CHMP2AO43633 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.58□□□□□ -2
CHMP2AO43633 AC105137.2-201ENST00000569073 466 ntBASIC2.58□□□□□ -2
CHMP2AO43633 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHMP2AO43633 AC091946.2-201ENST00000606105 291 ntBASIC2.58□□□□□ -2
CHMP2AO43633 TUG1_1.1-201ENST00000610654 145 ntBASIC2.58□□□□□ -2
CHMP2AO43633 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHMP2AO43633 U6.101-201ENST00000637707 76 ntBASIC2.58□□□□□ -2
CHMP2AO43633 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.58□□□□□ -2
CHMP2AO43633 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CHMP2AO43633 DBF4P1-201ENST00000412976 1892 ntBASIC2.58□□□□□ -2
CHMP2AO43633 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CHMP2AO43633 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.57□□□□□ -2
CHMP2AO43633 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
CHMP2AO43633 OR5H15-201ENST00000383696 930 ntBASIC2.57□□□□□ -2
CHMP2AO43633 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.57□□□□□ -2
CHMP2AO43633 C1DP1-201ENST00000426049 402 ntBASIC2.57□□□□□ -2
CHMP2AO43633 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.57□□□□□ -2
CHMP2AO43633 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.57□□□□□ -2
CHMP2AO43633 AC009237.8-201ENST00000445492 379 ntBASIC2.57□□□□□ -2
CHMP2AO43633 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.57□□□□□ -2
CHMP2AO43633 SEPT14P24-201ENST00000447236 180 ntBASIC2.57□□□□□ -2
CHMP2AO43633 DPPA3P1-201ENST00000448050 469 ntBASIC2.57□□□□□ -2
CHMP2AO43633 USP9YP34-201ENST00000453983 808 ntBASIC2.57□□□□□ -2
CHMP2AO43633 AC244505.3-201ENST00000454598 187 ntBASIC2.57□□□□□ -2
CHMP2AO43633 RNU6-420P-201ENST00000458780 107 ntBASIC2.57□□□□□ -2
CHMP2AO43633 AP000852.1-201ENST00000472460 573 ntBASIC2.57□□□□□ -2
CHMP2AO43633 OR4G11P-201ENST00000492842 939 ntBASIC2.57□□□□□ -2
CHMP2AO43633 AC023424.2-201ENST00000493479 777 ntBASIC2.57□□□□□ -2
CHMP2AO43633 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.57□□□□□ -2
CHMP2AO43633 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.57□□□□□ -2
CHMP2AO43633 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.57□□□□□ -2
CHMP2AO43633 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.57□□□□□ -2
CHMP2AO43633 AC023632.1-201ENST00000518463 375 ntBASIC2.57□□□□□ -2
CHMP2AO43633 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.57□□□□□ -2
CHMP2AO43633 AC044913.1-201ENST00000557200 430 ntBASIC2.57□□□□□ -2
CHMP2AO43633 AC027807.1-201ENST00000559921 996 ntBASIC2.57□□□□□ -2
CHMP2AO43633 AC013553.2-201ENST00000604244 589 ntBASIC2.57□□□□□ -2
CHMP2AO43633 DUXAP10-204ENST00000612052 616 ntBASIC2.57□□□□□ -2
CHMP2AO43633 AC011330.2-201ENST00000621680 635 ntBASIC2.57□□□□□ -2
CHMP2AO43633 AL160394.1-201ENST00000624765 724 ntBASIC2.57□□□□□ -2
CHMP2AO43633 Z99496.1-201ENST00000469424 1477 ntBASIC2.57□□□□□ -2
CHMP2AO43633 MTND5P6-201ENST00000422338 1798 ntBASIC2.56□□□□□ -2
CHMP2AO43633 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.56□□□□□ -2
CHMP2AO43633 FRG1BP-201ENST00000278882 761 ntBASIC2.56□□□□□ -2
CHMP2AO43633 RNU5A-1-201ENST00000362698 116 ntBASIC2.56□□□□□ -2
CHMP2AO43633 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHMP2AO43633 AC007064.1-201ENST00000412238 351 ntBASIC2.56□□□□□ -2
CHMP2AO43633 BTF3P8-201ENST00000414577 526 ntBASIC2.56□□□□□ -2
CHMP2AO43633 AC099548.1-201ENST00000421443 426 ntBASIC2.56□□□□□ -2
CHMP2AO43633 MTCYBP15-201ENST00000433123 1127 ntBASIC2.56□□□□□ -2
CHMP2AO43633 AL512844.2-201ENST00000433990 593 ntBASIC2.56□□□□□ -2
CHMP2AO43633 UBE2D3P1-201ENST00000436669 444 ntBASIC2.56□□□□□ -2
CHMP2AO43633 AC018634.1-201ENST00000437554 401 ntBASIC2.56□□□□□ -2
CHMP2AO43633 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.56□□□□□ -2
CHMP2AO43633 AC005297.2-201ENST00000450430 606 ntBASIC2.56□□□□□ -2
CHMP2AO43633 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.56□□□□□ -2
CHMP2AO43633 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.56□□□□□ -2
CHMP2AO43633 AC090096.1-201ENST00000489168 390 ntBASIC2.56□□□□□ -2
CHMP2AO43633 AL049874.1-201ENST00000489560 388 ntBASIC2.56□□□□□ -2
CHMP2AO43633 AC112198.4-201ENST00000515450 351 ntBASIC2.56□□□□□ -2
CHMP2AO43633 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.56□□□□□ -2
CHMP2AO43633 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.56□□□□□ -2
CHMP2AO43633 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.56□□□□□ -2
CHMP2AO43633 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CHMP2AO43633 MIR3670-2-201ENST00000582974 65 ntBASIC2.56□□□□□ -2
CHMP2AO43633 MIR5007-201ENST00000583098 95 ntBASIC2.56□□□□□ -2
CHMP2AO43633 MIR3670-1-201ENST00000584160 65 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms