Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PROM1O43490 AC107016.1-201ENST00000550463 337 ntBASIC4.02□□□□□ -1.77
PROM1O43490 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.02□□□□□ -1.77
PROM1O43490 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.02□□□□□ -1.77
PROM1O43490 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.02□□□□□ -1.77
PROM1O43490 AC078795.3-201ENST00000602913 472 ntBASIC4.02□□□□□ -1.77
PROM1O43490 AC025946.2-201ENST00000603398 234 ntBASIC4.02□□□□□ -1.77
PROM1O43490 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.02□□□□□ -1.77
PROM1O43490 AC103710.2-201ENST00000609912 942 ntBASIC4.02□□□□□ -1.77
PROM1O43490 FAM27D1-201ENST00000612308 341 ntBASIC4.02□□□□□ -1.77
PROM1O43490 AL442067.2-201ENST00000614033 363 ntBASIC4.02□□□□□ -1.77
PROM1O43490 AC130324.3-201ENST00000614165 542 ntBASIC4.02□□□□□ -1.77
PROM1O43490 AC079684.1-201ENST00000621405 437 ntBASIC4.02□□□□□ -1.77
PROM1O43490 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.02□□□□□ -1.77
PROM1O43490 FRG1KP-201ENST00000623592 341 ntBASIC4.02□□□□□ -1.77
PROM1O43490 AC034229.5-201ENST00000624258 185 ntBASIC4.02□□□□□ -1.77
PROM1O43490 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PROM1O43490 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PROM1O43490 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PROM1O43490 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.02□□□□□ -1.77
PROM1O43490 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PROM1O43490 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PROM1O43490 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.01□□□□□ -1.77
PROM1O43490 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PROM1O43490 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PROM1O43490 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PROM1O43490 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PROM1O43490 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.01□□□□□ -1.77
PROM1O43490 Y_RNA.22-201ENST00000362492 102 ntBASIC4.01□□□□□ -1.77
PROM1O43490 Y_RNA.58-201ENST00000362807 102 ntBASIC4.01□□□□□ -1.77
PROM1O43490 Y_RNA.154-201ENST00000363624 102 ntBASIC4.01□□□□□ -1.77
PROM1O43490 Y_RNA.166-201ENST00000363730 102 ntBASIC4.01□□□□□ -1.77
PROM1O43490 SNORA62.1-201ENST00000364287 154 ntBASIC4.01□□□□□ -1.77
PROM1O43490 RNY3P1-201ENST00000365085 102 ntBASIC4.01□□□□□ -1.77
PROM1O43490 RNY3-201ENST00000365484 102 ntBASIC4.01□□□□□ -1.77
PROM1O43490 RNU6-339P-201ENST00000384310 107 ntBASIC4.01□□□□□ -1.77
PROM1O43490 SNORD51-201ENST00000384320 80 ntBASIC4.01□□□□□ -1.77
PROM1O43490 Y_RNA.490-201ENST00000384413 102 ntBASIC4.01□□□□□ -1.77
PROM1O43490 MIR558-201ENST00000384920 94 ntBASIC4.01□□□□□ -1.77
PROM1O43490 AL445189.1-201ENST00000405722 338 ntBASIC4.01□□□□□ -1.77
PROM1O43490 RN7SKP32-201ENST00000410167 303 ntBASIC4.01□□□□□ -1.77
PROM1O43490 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.01□□□□□ -1.77
PROM1O43490 DUTP6-201ENST00000425573 462 ntBASIC4.01□□□□□ -1.77
PROM1O43490 EZH2P1-201ENST00000431167 291 ntBASIC4.01□□□□□ -1.77
PROM1O43490 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.01□□□□□ -1.77
PROM1O43490 AC073415.1-201ENST00000449240 153 ntBASIC4.01□□□□□ -1.77
PROM1O43490 GMFBP1-201ENST00000467831 427 ntBASIC4.01□□□□□ -1.77
PROM1O43490 AC034236.1-201ENST00000469891 373 ntBASIC4.01□□□□□ -1.77
PROM1O43490 ST13P14-201ENST00000474095 734 ntBASIC4.01□□□□□ -1.77
PROM1O43490 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.01□□□□□ -1.77
PROM1O43490 NIPA2P2-201ENST00000496376 1083 ntBASIC4.01□□□□□ -1.77
PROM1O43490 HMGN1P13-201ENST00000505795 138 ntBASIC4.01□□□□□ -1.77
PROM1O43490 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.01□□□□□ -1.77
PROM1O43490 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.01□□□□□ -1.77
PROM1O43490 FGF7P4-201ENST00000509595 295 ntBASIC4.01□□□□□ -1.77
PROM1O43490 AC008958.1-201ENST00000511047 682 ntBASIC4.01□□□□□ -1.77
PROM1O43490 RNU7-51P-201ENST00000516560 62 ntBASIC4.01□□□□□ -1.77
PROM1O43490 AC105029.1-201ENST00000520250 669 ntBASIC4.01□□□□□ -1.77
PROM1O43490 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.01□□□□□ -1.77
PROM1O43490 OR5B10P-201ENST00000532869 642 ntBASIC4.01□□□□□ -1.77
PROM1O43490 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.01□□□□□ -1.77
PROM1O43490 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.01□□□□□ -1.77
PROM1O43490 AC011611.1-201ENST00000552179 197 ntBASIC4.01□□□□□ -1.77
PROM1O43490 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.01□□□□□ -1.77
PROM1O43490 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.01□□□□□ -1.77
PROM1O43490 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.01□□□□□ -1.77
PROM1O43490 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.01□□□□□ -1.77
PROM1O43490 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.01□□□□□ -1.77
PROM1O43490 uc_338.5-201ENST00000611839 155 ntBASIC4.01□□□□□ -1.77
PROM1O43490 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.01□□□□□ -1.77
PROM1O43490 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.01□□□□□ -1.77
PROM1O43490 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.01□□□□□ -1.77
PROM1O43490 AL136313.1-201ENST00000624804 202 ntBASIC4.01□□□□□ -1.77
PROM1O43490 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PROM1O43490 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PROM1O43490 AC018555.1-201ENST00000567548 1980 ntBASIC4.01□□□□□ -1.77
PROM1O43490 AC116096.1-201ENST00000566804 2314 ntBASIC4.01□□□□□ -1.77
PROM1O43490 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PROM1O43490 MAPK10-253ENST00000641010 4072 ntBASIC4.01□□□□□ -1.77
PROM1O43490 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.01□□□□□ -1.77
PROM1O43490 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PROM1O43490 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PROM1O43490 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PROM1O43490 AP001486.2-201ENST00000561652 5113 ntBASIC4.01□□□□□ -1.77
PROM1O43490 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
PROM1O43490 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PROM1O43490 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.01□□□□□ -1.77
PROM1O43490 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PROM1O43490 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PROM1O43490 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4□□□□□ -1.77
PROM1O43490 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4□□□□□ -1.77
PROM1O43490 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PROM1O43490 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
PROM1O43490 RNU4-79P-201ENST00000362764 141 ntBASIC4□□□□□ -1.77
PROM1O43490 RNA5SP366-201ENST00000365454 123 ntBASIC4□□□□□ -1.77
PROM1O43490 Y_RNA.493-201ENST00000384422 102 ntBASIC4□□□□□ -1.77
PROM1O43490 MIR607-201ENST00000385241 96 ntBASIC4□□□□□ -1.77
PROM1O43490 MIR1179-201ENST00000408703 91 ntBASIC4□□□□□ -1.77
PROM1O43490 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4□□□□□ -1.77
PROM1O43490 RNU2-47P-201ENST00000410649 186 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms