Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.3□□□□□ -1.72
PRPF3O43395 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.3□□□□□ -1.72
PRPF3O43395 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF3O43395 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF3O43395 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF3O43395 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF3O43395 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.3□□□□□ -1.72
PRPF3O43395 MIR4644-201ENST00000579929 84 ntBASIC4.3□□□□□ -1.72
PRPF3O43395 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF3O43395 AL732618.1-201ENST00000623251 301 ntBASIC4.3□□□□□ -1.72
PRPF3O43395 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF3O43395 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF3O43395 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.3□□□□□ -1.72
PRPF3O43395 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF3O43395 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
PRPF3O43395 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF3O43395 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF3O43395 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF3O43395 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF3O43395 MIR23B-201ENST00000384832 97 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 AL445189.1-201ENST00000405722 338 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 SNORA57.3-201ENST00000411095 141 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.29□□□□□ -1.72
PRPF3O43395 ZNF90P2-204ENST00000419323 1075 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 USP9YP36-201ENST00000424581 829 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 RPS3AP44-201ENST00000425466 790 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 OR2AS1P-201ENST00000427827 319 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 RPL31P35-201ENST00000431058 377 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.29□□□□□ -1.72
PRPF3O43395 AC132479.1-201ENST00000449160 144 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 AC010631.1-201ENST00000474150 156 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 AC004924.1-201ENST00000480160 781 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 AC020593.1-201ENST00000507399 299 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.29□□□□□ -1.72
PRPF3O43395 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.29□□□□□ -1.72
PRPF3O43395 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
PRPF3O43395 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.29□□□□□ -1.72
PRPF3O43395 AC008489.1-201ENST00000524271 483 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.29□□□□□ -1.72
PRPF3O43395 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF3O43395 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.29□□□□□ -1.72
PRPF3O43395 AC008011.1-201ENST00000545989 227 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.29□□□□□ -1.72
PRPF3O43395 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.29□□□□□ -1.72
PRPF3O43395 AC110741.2-201ENST00000605278 268 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 OR5AK4P-201ENST00000635912 903 ntBASIC4.29□□□□□ -1.72
PRPF3O43395 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF3O43395 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF3O43395 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.28□□□□□ -1.72
PRPF3O43395 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.28□□□□□ -1.72
PRPF3O43395 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF3O43395 Y_RNA.6-201ENST00000362350 114 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 RNU5E-6P-201ENST00000365574 115 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 MIR514A1-201ENST00000385133 98 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 AL513331.1-201ENST00000411908 397 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.28□□□□□ -1.72
PRPF3O43395 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF3O43395 DPPA2P1-201ENST00000428060 556 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 AC073464.1-201ENST00000429823 534 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 OR2B8P-201ENST00000432841 938 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 NDUFB1P1-201ENST00000435191 180 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.28□□□□□ -1.72
PRPF3O43395 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.28□□□□□ -1.72
PRPF3O43395 AC079448.1-201ENST00000449377 373 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 SRRM1P2-201ENST00000464531 1192 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 AC007182.2-201ENST00000489251 402 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 AC079382.1-201ENST00000493346 557 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.28□□□□□ -1.72
PRPF3O43395 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.28□□□□□ -1.72
PRPF3O43395 AC114797.1-201ENST00000514003 728 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 RNU6-390P-201ENST00000516259 103 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 RNU6-1092P-201ENST00000516955 87 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 RN7SKP258-201ENST00000517151 304 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 AP003034.1-201ENST00000534621 422 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 NCAPGP2-201ENST00000557911 754 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.28□□□□□ -1.72
PRPF3O43395 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.28□□□□□ -1.72
PRPF3O43395 AP000860.1-201ENST00000605250 559 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 U4.5-201ENST00000617137 123 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 AL136313.1-201ENST00000624804 202 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 AC005609.4-201ENST00000625071 447 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF3O43395 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF3O43395 PRO1804-201ENST00000623780 2050 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PRPF3O43395 AC027514.1-201ENST00000588561 1603 ntBASIC4.28□□□□□ -1.72
PRPF3O43395 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
PRPF3O43395 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF3O43395 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.27□□□□□ -1.73
PRPF3O43395 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PRPF3O43395 MIR423-201ENST00000362201 94 ntBASIC4.27□□□□□ -1.73
PRPF3O43395 RNU1-18P-201ENST00000363062 164 ntBASIC4.27□□□□□ -1.73
PRPF3O43395 RNU6-169P-201ENST00000365336 107 ntBASIC4.27□□□□□ -1.73
PRPF3O43395 Y_RNA.516-201ENST00000384541 124 ntBASIC4.27□□□□□ -1.73
PRPF3O43395 MIR558-201ENST00000384920 94 ntBASIC4.27□□□□□ -1.73
PRPF3O43395 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PRPF3O43395 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.27□□□□□ -1.73
PRPF3O43395 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.27□□□□□ -1.73
PRPF3O43395 FCF1P1-201ENST00000432690 571 ntBASIC4.27□□□□□ -1.73
PRPF3O43395 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms