Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
NPHP1O15259 RPL7L1P10-201ENST00000427790 463 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.04□□□□□ -1.76
NPHP1O15259 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.04□□□□□ -1.76
NPHP1O15259 AC009237.8-201ENST00000445492 379 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.04□□□□□ -1.76
NPHP1O15259 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.04□□□□□ -1.76
NPHP1O15259 RPL21P8-201ENST00000465083 535 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 RPL23AP14-201ENST00000468281 468 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.04□□□□□ -1.76
NPHP1O15259 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.04□□□□□ -1.76
NPHP1O15259 RPL30P5-201ENST00000494923 336 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 AC008885.1-201ENST00000514930 301 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 RNU6-1256P-201ENST00000516539 103 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 RNU6-840P-201ENST00000517275 65 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NPHP1O15259 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.04□□□□□ -1.76
NPHP1O15259 UBL5P2-201ENST00000583788 219 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 AC018638.7-201ENST00000605836 1114 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.04□□□□□ -1.76
NPHP1O15259 AC112204.3-201ENST00000623822 332 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NPHP1O15259 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NPHP1O15259 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
NPHP1O15259 AC004944.1-201ENST00000517807 3059 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPHP1O15259 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.04□□□□□ -1.76
NPHP1O15259 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NPHP1O15259 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPHP1O15259 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPHP1O15259 OR1S2-201ENST00000302592 978 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 RNU1-70P-201ENST00000362618 164 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 RNU6-223P-201ENST00000362830 107 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPHP1O15259 RNU1-39P-201ENST00000383897 165 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 MRPL50P2-201ENST00000416821 482 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.03□□□□□ -1.76
NPHP1O15259 ATP5C1P1-201ENST00000441945 895 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.03□□□□□ -1.76
NPHP1O15259 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.03□□□□□ -1.76
NPHP1O15259 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.03□□□□□ -1.76
NPHP1O15259 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.03□□□□□ -1.76
NPHP1O15259 AC021146.5-201ENST00000503544 545 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 PCBP2P3-201ENST00000509726 843 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 TTC39CP1-201ENST00000512513 755 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.03□□□□□ -1.76
NPHP1O15259 PSMA2P1-201ENST00000526365 646 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NPHP1O15259 AC124947.2-202ENST00000552735 133 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.03□□□□□ -1.76
NPHP1O15259 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.03□□□□□ -1.76
NPHP1O15259 OR4H12P-201ENST00000556269 907 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.03□□□□□ -1.76
NPHP1O15259 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.03□□□□□ -1.76
NPHP1O15259 AC006023.1-201ENST00000603944 259 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 AC004696.1-201ENST00000614345 607 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 AC013476.2-201ENST00000614456 459 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 AL138880.2-201ENST00000616214 239 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 SNORD39.4-201ENST00000620099 78 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 AC092192.1-201ENST00000633154 1018 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.03□□□□□ -1.76
NPHP1O15259 AC017071.1-201ENST00000564407 2204 ntBASIC4.03□□□□□ -1.76
NPHP1O15259 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.03□□□□□ -1.76
NPHP1O15259 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
NPHP1O15259 GABRG2-229ENST00000641017 3628 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 AC000403.1-201ENST00000613696 3585 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NPHP1O15259 SNORA71.1-201ENST00000364523 117 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 U8.14-201ENST00000390843 143 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 AL109755.1-201ENST00000401791 649 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.02□□□□□ -1.77
NPHP1O15259 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.02□□□□□ -1.77
NPHP1O15259 UBE2FP1-201ENST00000416536 447 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.02□□□□□ -1.77
NPHP1O15259 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.02□□□□□ -1.77
NPHP1O15259 MTCYBP39-201ENST00000437562 491 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.02□□□□□ -1.77
NPHP1O15259 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.02□□□□□ -1.77
NPHP1O15259 AC107083.1-201ENST00000439643 279 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 MTND2P24-201ENST00000453434 806 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 AC055855.1-201ENST00000489563 579 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.02□□□□□ -1.77
NPHP1O15259 AC006445.2-201ENST00000510061 472 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.02□□□□□ -1.77
NPHP1O15259 SNORD59.2-201ENST00000516873 68 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 AP006245.1-201ENST00000522549 120 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.02□□□□□ -1.77
NPHP1O15259 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.02□□□□□ -1.77
NPHP1O15259 AC007954.1-201ENST00000554198 494 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 AL355836.1-201ENST00000555951 870 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.02□□□□□ -1.77
NPHP1O15259 AL133153.1-201ENST00000557756 303 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.02□□□□□ -1.77
NPHP1O15259 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.02□□□□□ -1.77
NPHP1O15259 AP000403.1-201ENST00000603349 851 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 AL360219.1-201ENST00000610230 366 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 AC004223.4-201ENST00000612426 332 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 SNORA50A-202ENST00000629536 136 ntBASIC4.02□□□□□ -1.77
NPHP1O15259 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms