Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.28□□□□□ -1.88
TO15178 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.28□□□□□ -1.88
TO15178 PGBD4P3-201ENST00000440731 581 ntBASIC3.28□□□□□ -1.88
TO15178 ELOCP30-201ENST00000447108 299 ntBASIC3.28□□□□□ -1.88
TO15178 AC020893.1-201ENST00000502452 580 ntBASIC3.28□□□□□ -1.88
TO15178 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.28□□□□□ -1.88
TO15178 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TO15178 AC104619.4-201ENST00000510773 249 ntBASIC3.28□□□□□ -1.88
TO15178 AL359273.1-201ENST00000510918 627 ntBASIC3.28□□□□□ -1.88
TO15178 SNORA31.1-201ENST00000515993 133 ntBASIC3.28□□□□□ -1.88
TO15178 SNORA31.5-201ENST00000516190 133 ntBASIC3.28□□□□□ -1.88
TO15178 AP006245.1-201ENST00000522549 120 ntBASIC3.28□□□□□ -1.88
TO15178 DEFB108A-201ENST00000530110 222 ntBASIC3.28□□□□□ -1.88
TO15178 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.28□□□□□ -1.88
TO15178 MIR4425-201ENST00000580572 84 ntBASIC3.28□□□□□ -1.88
TO15178 MIR3682-201ENST00000581338 84 ntBASIC3.28□□□□□ -1.88
TO15178 MIR3118-1-201ENST00000581787 76 ntBASIC3.28□□□□□ -1.88
TO15178 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.28□□□□□ -1.88
TO15178 AC105224.1-201ENST00000587055 421 ntBASIC3.28□□□□□ -1.88
TO15178 AC064872.1-201ENST00000604823 1072 ntBASIC3.28□□□□□ -1.88
TO15178 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.28□□□□□ -1.88
TO15178 AC131902.3-201ENST00000611767 581 ntBASIC3.28□□□□□ -1.88
TO15178 AP001506.1-201ENST00000615444 211 ntBASIC3.28□□□□□ -1.88
TO15178 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.28□□□□□ -1.88
TO15178 AL034408.1-202ENST00000636088 415 ntBASIC3.28□□□□□ -1.88
TO15178 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
TO15178 AC099654.13-201ENST00000639774 207 ntBASIC3.28□□□□□ -1.88
TO15178 AC007656.2-201ENST00000624902 4547 ntBASIC3.28□□□□□ -1.88
TO15178 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.28□□□□□ -1.88
TO15178 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.28□□□□□ -1.88
TO15178 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.28□□□□□ -1.88
TO15178 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TO15178 AL356274.2-201ENST00000624379 3752 ntBASIC3.28□□□□□ -1.88
TO15178 TEX21P-201ENST00000447107 1476 ntBASIC3.28□□□□□ -1.88
TO15178 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
TO15178 CUL1P1-201ENST00000509510 2425 ntBASIC3.28□□□□□ -1.89
TO15178 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.28□□□□□ -1.89
TO15178 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.27□□□□□ -1.89
TO15178 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TO15178 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TO15178 RNU2-8P-201ENST00000410727 190 ntBASIC3.27□□□□□ -1.89
TO15178 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.27□□□□□ -1.89
TO15178 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.27□□□□□ -1.89
TO15178 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.27□□□□□ -1.89
TO15178 DPPA2P1-201ENST00000428060 556 ntBASIC3.27□□□□□ -1.89
TO15178 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.27□□□□□ -1.89
TO15178 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.27□□□□□ -1.89
TO15178 MTND6P13-201ENST00000443510 523 ntBASIC3.27□□□□□ -1.89
TO15178 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.27□□□□□ -1.89
TO15178 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.27□□□□□ -1.89
TO15178 MTND1P27-201ENST00000451117 902 ntBASIC3.27□□□□□ -1.89
TO15178 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.27□□□□□ -1.89
TO15178 RBMY2UP-201ENST00000453474 324 ntBASIC3.27□□□□□ -1.89
TO15178 AC084357.1-201ENST00000473404 255 ntBASIC3.27□□□□□ -1.89
TO15178 HSPE1P6-201ENST00000479457 291 ntBASIC3.27□□□□□ -1.89
TO15178 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TO15178 ARL2BPP4-201ENST00000506854 471 ntBASIC3.27□□□□□ -1.89
TO15178 CBX3P3-201ENST00000508108 532 ntBASIC3.27□□□□□ -1.89
TO15178 AC109464.2-201ENST00000510242 943 ntBASIC3.27□□□□□ -1.89
TO15178 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.27□□□□□ -1.89
TO15178 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.27□□□□□ -1.89
TO15178 GMPSP1-201ENST00000514075 579 ntBASIC3.27□□□□□ -1.89
TO15178 Y_RNA.672-201ENST00000516289 104 ntBASIC3.27□□□□□ -1.89
TO15178 SNORA67.7-201ENST00000516664 135 ntBASIC3.27□□□□□ -1.89
TO15178 RNU6-840P-201ENST00000517275 65 ntBASIC3.27□□□□□ -1.89
TO15178 AC103843.2-201ENST00000530523 682 ntBASIC3.27□□□□□ -1.89
TO15178 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.27□□□□□ -1.89
TO15178 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.27□□□□□ -1.89
TO15178 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.27□□□□□ -1.89
TO15178 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.27□□□□□ -1.89
TO15178 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.27□□□□□ -1.89
TO15178 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.27□□□□□ -1.89
TO15178 RPL23AP84-201ENST00000571193 464 ntBASIC3.27□□□□□ -1.89
TO15178 AC137800.2-201ENST00000574375 120 ntBASIC3.27□□□□□ -1.89
TO15178 MIR3158-1-201ENST00000583596 81 ntBASIC3.27□□□□□ -1.89
TO15178 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.27□□□□□ -1.89
TO15178 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.27□□□□□ -1.89
TO15178 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.27□□□□□ -1.89
TO15178 AC106900.2-201ENST00000604994 317 ntBASIC3.27□□□□□ -1.89
TO15178 AC008277.2-201ENST00000605196 797 ntBASIC3.27□□□□□ -1.89
TO15178 AL391813.2-201ENST00000609113 322 ntBASIC3.27□□□□□ -1.89
TO15178 AC108747.1-201ENST00000609508 535 ntBASIC3.27□□□□□ -1.89
TO15178 AC011939.3-201ENST00000613686 466 ntBASIC3.27□□□□□ -1.89
TO15178 AC010678.1-201ENST00000614118 713 ntBASIC3.27□□□□□ -1.89
TO15178 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.27□□□□□ -1.89
TO15178 PWAR6-201ENST00000552334 4618 ntBASIC3.27□□□□□ -1.89
TO15178 AL079305.1-201ENST00000623159 3008 ntBASIC3.27□□□□□ -1.89
TO15178 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.27□□□□□ -1.89
TO15178 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.27□□□□□ -1.89
TO15178 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.26□□□□□ -1.89
TO15178 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TO15178 AL049781.1-201ENST00000623195 3585 ntBASIC3.26□□□□□ -1.89
TO15178 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.26□□□□□ -1.89
TO15178 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TO15178 AC068647.1-201ENST00000489539 2265 ntBASIC3.26□□□□□ -1.89
TO15178 AC090740.1-201ENST00000623193 2262 ntBASIC3.26□□□□□ -1.89
TO15178 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.26□□□□□ -1.89
TO15178 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TO15178 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TO15178 SNORA62.3-201ENST00000365110 153 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms