Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDX4O14627 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDX4O14627 RNU6-462P-201ENST00000362659 105 ntBASIC2.84□□□□□ -1.95
CDX4O14627 Y_RNA.436-201ENST00000384097 102 ntBASIC2.84□□□□□ -1.95
CDX4O14627 MIR34A-201ENST00000385130 110 ntBASIC2.84□□□□□ -1.95
CDX4O14627 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CDX4O14627 RNA5SP129-201ENST00000410276 118 ntBASIC2.84□□□□□ -1.95
CDX4O14627 RPL7P8-201ENST00000411964 730 ntBASIC2.84□□□□□ -1.95
CDX4O14627 BMS1P22-201ENST00000414726 313 ntBASIC2.84□□□□□ -1.95
CDX4O14627 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.84□□□□□ -1.95
CDX4O14627 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.84□□□□□ -1.95
CDX4O14627 PAXBP1P1-201ENST00000449315 447 ntBASIC2.84□□□□□ -1.95
CDX4O14627 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.84□□□□□ -1.95
CDX4O14627 FDX1P2-201ENST00000450769 375 ntBASIC2.84□□□□□ -1.95
CDX4O14627 RPS24P6-201ENST00000452670 400 ntBASIC2.84□□□□□ -1.95
CDX4O14627 MEMO1P3-201ENST00000459811 302 ntBASIC2.84□□□□□ -1.95
CDX4O14627 RN7SL330P-201ENST00000469709 307 ntBASIC2.84□□□□□ -1.95
CDX4O14627 AL049830.2-201ENST00000480072 201 ntBASIC2.84□□□□□ -1.95
CDX4O14627 AC023424.2-201ENST00000493479 777 ntBASIC2.84□□□□□ -1.95
CDX4O14627 AC093278.1-201ENST00000494700 600 ntBASIC2.84□□□□□ -1.95
CDX4O14627 AC091435.1-201ENST00000505442 584 ntBASIC2.84□□□□□ -1.95
CDX4O14627 AC021146.1-201ENST00000511202 716 ntBASIC2.84□□□□□ -1.95
CDX4O14627 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.84□□□□□ -1.95
CDX4O14627 MTCO2P32-201ENST00000514865 403 ntBASIC2.84□□□□□ -1.95
CDX4O14627 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.84□□□□□ -1.95
CDX4O14627 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.84□□□□□ -1.95
CDX4O14627 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.84□□□□□ -1.95
CDX4O14627 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.84□□□□□ -1.95
CDX4O14627 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.84□□□□□ -1.95
CDX4O14627 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.84□□□□□ -1.95
CDX4O14627 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.84□□□□□ -1.95
CDX4O14627 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.84□□□□□ -1.95
CDX4O14627 AC012435.1-202ENST00000568772 240 ntBASIC2.84□□□□□ -1.95
CDX4O14627 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.84□□□□□ -1.95
CDX4O14627 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.84□□□□□ -1.95
CDX4O14627 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.84□□□□□ -1.95
CDX4O14627 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CDX4O14627 AL596245.1-201ENST00000618994 362 ntBASIC2.84□□□□□ -1.95
CDX4O14627 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.84□□□□□ -1.95
CDX4O14627 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDX4O14627 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CDX4O14627 AL445523.1-201ENST00000451184 1362 ntBASIC2.84□□□□□ -1.96
CDX4O14627 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
CDX4O14627 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CDX4O14627 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CDX4O14627 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.83□□□□□ -1.96
CDX4O14627 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDX4O14627 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
CDX4O14627 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CDX4O14627 RNA5SP295-201ENST00000362655 121 ntBASIC2.83□□□□□ -1.96
CDX4O14627 DEFB109C-201ENST00000382575 264 ntBASIC2.83□□□□□ -1.96
CDX4O14627 DEFB109B-201ENST00000382656 264 ntBASIC2.83□□□□□ -1.96
CDX4O14627 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDX4O14627 BTF3L4P1-201ENST00000413813 468 ntBASIC2.83□□□□□ -1.96
CDX4O14627 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.83□□□□□ -1.96
CDX4O14627 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.83□□□□□ -1.96
CDX4O14627 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.83□□□□□ -1.96
CDX4O14627 AC002075.2-201ENST00000425207 252 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.83□□□□□ -1.96
CDX4O14627 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.83□□□□□ -1.96
CDX4O14627 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.83□□□□□ -1.96
CDX4O14627 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.83□□□□□ -1.96
CDX4O14627 TPTE2P5-203ENST00000458118 728 ntBASIC2.83□□□□□ -1.96
CDX4O14627 RPL31P3-201ENST00000458430 332 ntBASIC2.83□□□□□ -1.96
CDX4O14627 snoU13.8-201ENST00000458890 104 ntBASIC2.83□□□□□ -1.96
CDX4O14627 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AL024509.2-201ENST00000493462 493 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AC104685.1-201ENST00000502445 371 ntBASIC2.83□□□□□ -1.96
CDX4O14627 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.83□□□□□ -1.96
CDX4O14627 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.83□□□□□ -1.96
CDX4O14627 TXNP6-201ENST00000510190 310 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AC008413.1-201ENST00000511864 177 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AC024589.1-201ENST00000512207 263 ntBASIC2.83□□□□□ -1.96
CDX4O14627 MTND5P13-201ENST00000513046 1079 ntBASIC2.83□□□□□ -1.96
CDX4O14627 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDX4O14627 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CDX4O14627 AC126177.3-201ENST00000551839 688 ntBASIC2.83□□□□□ -1.96
CDX4O14627 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDX4O14627 TGIF1P1-201ENST00000558095 802 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AC011260.1-201ENST00000578420 472 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.83□□□□□ -1.96
CDX4O14627 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.83□□□□□ -1.96
CDX4O14627 AC015871.2-201ENST00000603605 948 ntBASIC2.83□□□□□ -1.96
CDX4O14627 DUXAP11-201ENST00000603858 526 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AL031176.1-201ENST00000604554 466 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AC018714.1-201ENST00000605028 208 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AL365503.1-201ENST00000605247 905 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AC135507.1-201ENST00000607214 561 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AC004223.4-201ENST00000612426 332 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AC092140.2-201ENST00000618027 521 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AL445264.1-201ENST00000621719 171 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AL356585.4-201ENST00000623078 1229 ntBASIC2.83□□□□□ -1.96
CDX4O14627 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.83□□□□□ -1.96
CDX4O14627 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDX4O14627 AL022578.1-201ENST00000439330 1433 ntBASIC2.83□□□□□ -1.96
CDX4O14627 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.83□□□□□ -1.96
CDX4O14627 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.83□□□□□ -1.96
CDX4O14627 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CDX4O14627 AL161781.1-201ENST00000354277 403 ntBASIC2.82□□□□□ -1.96
CDX4O14627 MIR30E-201ENST00000362104 92 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms