Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.7□□□□□ -1.82
EIF3FO00303 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.7□□□□□ -1.82
EIF3FO00303 MIR3609-201ENST00000582661 80 ntBASIC3.7□□□□□ -1.82
EIF3FO00303 AC040904.1-201ENST00000590850 223 ntBASIC3.7□□□□□ -1.82
EIF3FO00303 RSL24D1P11-201ENST00000591045 491 ntBASIC3.7□□□□□ -1.82
EIF3FO00303 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.7□□□□□ -1.82
EIF3FO00303 AC119751.7-201ENST00000600494 245 ntBASIC3.7□□□□□ -1.82
EIF3FO00303 AC005344.1-201ENST00000613391 459 ntBASIC3.7□□□□□ -1.82
EIF3FO00303 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.7□□□□□ -1.82
EIF3FO00303 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
EIF3FO00303 AL354798.1-201ENST00000622505 329 ntBASIC3.7□□□□□ -1.82
EIF3FO00303 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.7□□□□□ -1.82
EIF3FO00303 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
EIF3FO00303 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.7□□□□□ -1.82
EIF3FO00303 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
EIF3FO00303 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
EIF3FO00303 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
EIF3FO00303 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.7□□□□□ -1.82
EIF3FO00303 AC007656.2-201ENST00000624902 4547 ntBASIC3.7□□□□□ -1.82
EIF3FO00303 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
EIF3FO00303 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
EIF3FO00303 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EIF3FO00303 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.69□□□□□ -1.82
EIF3FO00303 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EIF3FO00303 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EIF3FO00303 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EIF3FO00303 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EIF3FO00303 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EIF3FO00303 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EIF3FO00303 Y_RNA.201-201ENST00000364052 96 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 RNY1P12-201ENST00000364251 105 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 SNORA48.8-201ENST00000391324 134 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 SOD2P1-201ENST00000396543 562 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 HSPE1P8-201ENST00000406997 288 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.69□□□□□ -1.82
EIF3FO00303 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.69□□□□□ -1.82
EIF3FO00303 ELOCP4-201ENST00000420090 333 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 MTCO2P34-201ENST00000421994 607 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 AL591419.1-201ENST00000427423 339 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.69□□□□□ -1.82
EIF3FO00303 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.69□□□□□ -1.82
EIF3FO00303 MTCO1P19-201ENST00000443487 500 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 GAPDHP17-201ENST00000449858 1001 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.69□□□□□ -1.82
EIF3FO00303 RN7SL132P-201ENST00000478131 296 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.69□□□□□ -1.82
EIF3FO00303 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.69□□□□□ -1.82
EIF3FO00303 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
EIF3FO00303 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.69□□□□□ -1.82
EIF3FO00303 RNU7-51P-201ENST00000516560 62 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.69□□□□□ -1.82
EIF3FO00303 ARL2BPP2-201ENST00000550907 489 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.69□□□□□ -1.82
EIF3FO00303 MIR5187-201ENST00000583479 76 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.69□□□□□ -1.82
EIF3FO00303 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.69□□□□□ -1.82
EIF3FO00303 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.69□□□□□ -1.82
EIF3FO00303 BNIP3P33-201ENST00000598912 569 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 AL161729.4-201ENST00000604650 476 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 BRDTP1-201ENST00000605735 677 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 MIR6875-201ENST00000617506 72 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 AC244100.1-202ENST00000621554 382 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 FP236240.3-201ENST00000623061 327 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.69□□□□□ -1.82
EIF3FO00303 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.69□□□□□ -1.82
EIF3FO00303 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.69□□□□□ -1.82
EIF3FO00303 MTND1P37-201ENST00000636562 264 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 CEP170P1-201ENST00000502249 4587 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 MFSD8-236ENST00000641509 4050 ntBASIC3.69□□□□□ -1.82
EIF3FO00303 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.69□□□□□ -1.82
EIF3FO00303 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
EIF3FO00303 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.68□□□□□ -1.82
EIF3FO00303 AP004289.2-201ENST00000444413 1457 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
EIF3FO00303 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
EIF3FO00303 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
EIF3FO00303 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.68□□□□□ -1.82
EIF3FO00303 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
EIF3FO00303 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.68□□□□□ -1.82
EIF3FO00303 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
EIF3FO00303 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
EIF3FO00303 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
EIF3FO00303 Y_RNA.51-201ENST00000362725 102 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 RN7SKP280-201ENST00000364196 304 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 RNU5E-6P-201ENST00000365574 115 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.68□□□□□ -1.82
EIF3FO00303 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.68□□□□□ -1.82
EIF3FO00303 AC010153.1-201ENST00000432862 727 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 MTATP6P30-201ENST00000443540 664 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 AC244505.5-201ENST00000443639 207 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 MTCO2P18-201ENST00000457151 658 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 HMGN2P13-201ENST00000476476 274 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 RAP1BP2-201ENST00000478270 544 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 AL160314.1-201ENST00000490836 438 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 RNA5SP208-201ENST00000516156 78 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 Vault.3-201ENST00000516676 95 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 SNORA18.6-201ENST00000516792 115 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 SCARNA14-201ENST00000516903 136 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 RNU6-1092P-201ENST00000516955 87 ntBASIC3.68□□□□□ -1.82
EIF3FO00303 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms