Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AL049779.4-201ENST00000604500 156 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 RPL23AP88-201ENST00000605759 454 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 MIR8084-201ENST00000614105 89 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AP003400.6-201ENST00000624698 740 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 HPVC1-201ENST00000629899 1198 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 PABPC1P7-201ENST00000413177 1513 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 DEFB109C-201ENST00000382575 264 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 DEFB109B-201ENST00000382656 264 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 MIR548J-201ENST00000408833 112 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 COL6A4P2-205ENST00000509855 506 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC008494.2-201ENST00000514544 370 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 HMGB1P46-201ENST00000520062 610 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC022790.1-201ENST00000522872 204 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC103810.1-201ENST00000579873 453 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC080188.3-201ENST00000624842 748 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC083865.1-201ENST00000636634 831 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 MTND5P11-201ENST00000511037 1812 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 ZNF271P-202ENST00000465539 1970 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 RNA5SP27-201ENST00000363839 119 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 MIR1303-201ENST00000408625 86 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AC109583.1-201ENST00000432156 268 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 MTCO3P43-201ENST00000440974 771 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AL035407.2-201ENST00000454090 378 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AC096992.1-201ENST00000459808 709 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 COX6CP14-201ENST00000469580 174 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AC021146.8-201ENST00000507455 733 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AC112518.2-201ENST00000508565 425 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 RNU6-1004P-201ENST00000516584 111 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AC008562.1-201ENST00000521763 330 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AC109446.2-201ENST00000567872 497 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 DUXAP3-201ENST00000603616 594 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AC069304.3-201ENST00000603938 1084 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AC080078.3-201ENST00000605407 463 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 MTND5P31-201ENST00000419366 1374 ntBASIC1.48□□□□□ -2.17
COL6A6A6NMZ7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 SNORD56.5-201ENST00000364281 72 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 RPL23AP29-201ENST00000397284 453 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 POLHP1-201ENST00000411806 470 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AL133384.1-201ENST00000412744 351 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AF274854.1-201ENST00000413236 615 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 ARL5AP2-201ENST00000444698 533 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC025033.1-201ENST00000463883 194 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 OR52A4P-202ENST00000481634 799 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 OR9N1P-202ENST00000494289 481 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AP004242.1-201ENST00000533701 349 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC092451.2-201ENST00000538746 658 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC018754.1-201ENST00000607486 925 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC021851.1-201ENST00000608537 1082 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC107308.1-201ENST00000615897 301 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC006213.5-201ENST00000619673 288 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 OR4G1P-203ENST00000641984 1631 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 OR4G11P-202ENST00000642116 1414 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 RNU6-1293P-201ENST00000384077 107 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AP000567.1-201ENST00000406413 156 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 RPL31P2-201ENST00000413849 377 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms