Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 NDUFB4P6-201ENST00000436819 366 ntBASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 BX276092.4-201ENST00000452056 248 ntBASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 AC107398.1-201ENST00000486904 505 ntBASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 RN7SKP179-201ENST00000516126 217 ntBASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 AL050343.2-201ENST00000607338 280 ntBASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 AC025016.1-201ENST00000616746 682 ntBASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CPSF4LA6NMK7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 OR4G2P-202ENST00000641004 1759 ntBASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 RNA5SP391-201ENST00000363456 119 ntBASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 CIR1P3-201ENST00000405137 479 ntBASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 RNU2-21P-201ENST00000410368 188 ntBASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 AL133384.1-201ENST00000412744 351 ntBASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 RPL23AP76-201ENST00000441860 458 ntBASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 AC026801.1-201ENST00000497178 464 ntBASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 AC011611.5-201ENST00000552477 578 ntBASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 MIR3117-201ENST00000584034 78 ntBASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 AC136601.2-201ENST00000604356 474 ntBASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 AC005332.10-201ENST00000612725 619 ntBASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 SDR42E1P2-201ENST00000614861 481 ntBASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 AC243756.2-201ENST00000618406 463 ntBASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 AC091304.6-201ENST00000619761 202 ntBASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 SDR42E1P4-201ENST00000620894 481 ntBASIC1.09□□□□□ -2.23
CPSF4LA6NMK7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 SNORA7.1-201ENST00000363750 139 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 ARF4P4-201ENST00000439608 520 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 AL357134.1-201ENST00000445848 426 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 FDX1P2-201ENST00000450769 375 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 AC009474.2-201ENST00000451383 136 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 AC092155.2-201ENST00000454675 477 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 RNU7-95P-201ENST00000459222 64 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 EIF4EP3-201ENST00000498782 656 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 COL6A4P2-205ENST00000509855 506 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 AC118942.1-201ENST00000529674 1035 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 TRAV11-201ENST00000539512 339 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 GNAI2P1-201ENST00000541815 315 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 AC008269.2-201ENST00000561915 1105 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 AC092474.3-201ENST00000603022 568 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 AC007620.3-201ENST00000608131 497 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 AC107214.2-201ENST00000608204 634 ntBASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CPSF4LA6NMK7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 RNU4-91P-201ENST00000364778 135 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 RPS4XP3-201ENST00000398541 413 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AL513475.1-201ENST00000406602 315 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 OR51A5P-201ENST00000415429 942 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 RPS15AP40-201ENST00000419621 391 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 ARL2BPP3-201ENST00000421226 480 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 TOMM20P4-201ENST00000427861 435 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 OSTCP8-201ENST00000445117 448 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 HSPE1P24-201ENST00000450782 238 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 BX322784.1-201ENST00000455793 1077 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 RPL36AP21-201ENST00000490372 323 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AC105252.1-201ENST00000503089 286 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AC108210.2-201ENST00000503681 201 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 OR10V3P-201ENST00000525712 725 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AP003717.3-201ENST00000544832 1180 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AC084364.2-201ENST00000546924 395 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AC023043.2-201ENST00000589678 1026 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AC073413.2-201ENST00000604332 360 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AC025754.2-201ENST00000606491 432 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AL391813.2-201ENST00000609113 322 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms