Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 C1DP1-201ENST00000426049 402 ntBASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 AC008850.1-201ENST00000427546 362 ntBASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 AC006445.1-201ENST00000491925 405 ntBASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 AC114786.4-201ENST00000508771 728 ntBASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 AC114797.1-201ENST00000514003 728 ntBASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 RN7SKP31-201ENST00000516354 278 ntBASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 RPL23AP84-201ENST00000571193 464 ntBASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 MIR3200-201ENST00000580767 85 ntBASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 MIR3117-201ENST00000584034 78 ntBASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 MTATP6P2-201ENST00000603319 678 ntBASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 AL355877.2-201ENST00000603670 358 ntBASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 AL645944.1-201ENST00000603857 493 ntBASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 AC023158.2-201ENST00000614876 543 ntBASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 AL357080.1-201ENST00000617394 239 ntBASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 AL603758.1-201ENST00000618654 241 ntBASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.04□□□□□ -2.08
RBFOX3A6NFN3 AL359693.1-201ENST00000614959 2407 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 RPL21P132-201ENST00000331267 462 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 SNORA67.1-201ENST00000364749 141 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 RNU1-140P-201ENST00000365040 165 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 RNU6-359P-201ENST00000365466 108 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 Y_RNA.548-201ENST00000384656 105 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 RNU6-443P-201ENST00000384780 107 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 MIR128-1-201ENST00000384921 82 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 SNORA48.2-201ENST00000390926 124 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AL162578.1-201ENST00000406202 378 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 RNU2-42P-201ENST00000410697 113 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 TPMTP2-201ENST00000414372 726 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AC007435.1-201ENST00000421086 415 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AL139421.1-201ENST00000423010 169 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 MTND4P6-201ENST00000438297 472 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AL513328.1-201ENST00000446460 224 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 ARPC3P5-201ENST00000448802 534 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 NDUFB4P2-201ENST00000509515 391 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 RNU6-1225P-201ENST00000516336 65 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 CKS1BP7-201ENST00000522230 235 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 NDUFS5P6-201ENST00000529136 295 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AL136520.1-202ENST00000555494 763 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 MIR4325-201ENST00000583049 90 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AC005000.2-201ENST00000605468 310 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AC135507.1-201ENST00000607214 561 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 AC007336.1-201ENST00000576365 3828 ntBASIC2.03□□□□□ -2.08
RBFOX3A6NFN3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 PABPC1P9-201ENST00000426076 1612 ntBASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 AL109755.1-201ENST00000401791 649 ntBASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 RNU2-33P-201ENST00000410344 192 ntBASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 AC096664.2-201ENST00000411843 406 ntBASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 AC007064.1-201ENST00000412238 351 ntBASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 AC080125.1-201ENST00000414888 684 ntBASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 USP9YP20-201ENST00000419224 558 ntBASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 AC104389.3-201ENST00000445629 235 ntBASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 DPPA3P1-201ENST00000448050 469 ntBASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 NANOGNBP1-201ENST00000448444 480 ntBASIC2.02□□□□□ -2.09
RBFOX3A6NFN3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms