Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 MIR3915-201ENST00000578518 97 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 MIR4637-201ENST00000582405 84 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 AC040904.1-201ENST00000590850 223 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 AC245297.2-201ENST00000610119 565 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 AF246928.1-201ENST00000623768 87 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 AC097714.1-201ENST00000511272 1647 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 AL161431.1-201ENST00000618966 4205 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 AC092593.1-201ENST00000515413 1815 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 AC087359.1-201ENST00000508335 1740 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AP002907.1-201ENST00000606361 1430 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 MIR1284-201ENST00000408337 120 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 MTATP6P27-201ENST00000416987 621 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC234781.2-201ENST00000426370 994 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 DPPA2P1-201ENST00000428060 556 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AL589823.1-201ENST00000429577 183 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AP000936.2-201ENST00000447151 681 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC108860.1-201ENST00000484521 383 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 LINC00888-204ENST00000487386 421 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC117532.1-201ENST00000514638 323 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 RNA5SP341-201ENST00000516261 117 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 RNA5SP76-201ENST00000516277 87 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 SNORA70.16-201ENST00000516390 95 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC104986.1-201ENST00000517978 436 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 HSPE1P3-201ENST00000559254 309 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC090616.2-202ENST00000584248 222 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 VN1R82P-201ENST00000601481 356 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 WISP1-OT1-201ENST00000602893 642 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 DUXAP11-201ENST00000603858 526 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC121247.2-201ENST00000604776 136 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC112220.3-201ENST00000605502 502 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC024560.3-201ENST00000608482 349 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC005046.1-201ENST00000608515 625 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC004223.4-201ENST00000612426 332 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 AC107871.2-201ENST00000612894 502 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 CDR1-202ENST00000625883 1485 ntBASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM49BA6NDI0 DEFB108F-201ENST00000344638 222 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 RNU6-343P-201ENST00000364709 104 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 RNU2-43P-201ENST00000410306 190 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AC118469.1-201ENST00000442943 488 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AL592447.1-201ENST00000447592 540 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 NIPA2P5-201ENST00000452282 464 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AP001992.1-205ENST00000462248 379 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 TMEM251P1-201ENST00000503717 318 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AL359273.1-201ENST00000510918 627 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 MTCO3P28-201ENST00000513351 515 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AC091826.1-201ENST00000514065 313 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 SCGB1D5P-201ENST00000515134 247 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 SCARNA13-201ENST00000516672 275 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 DEFB108D-201ENST00000527787 222 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AP000857.1-201ENST00000532151 543 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 OR7K1P-201ENST00000546439 926 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 CYCSP2-201ENST00000558168 301 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AC106782.4-201ENST00000568264 210 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 MAGOH2P-202ENST00000584384 429 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AP001981.2-201ENST00000603241 418 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AC069304.2-201ENST00000605154 435 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.12□□□□□ -1.91
TRIM49BA6NDI0 AC010338.1-201ENST00000621823 717 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms