Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC196A0A1B0GTZ2 AF038458.1-201ENST00000588406 262 ntBASIC3.82□□□□□ -1.8
CCDC196A0A1B0GTZ2 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC004908.2-201ENST00000609090 574 ntBASIC3.82□□□□□ -1.8
CCDC196A0A1B0GTZ2 TUG1_2.1-201ENST00000614234 87 ntBASIC3.82□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL110115.1-201ENST00000614396 364 ntBASIC3.82□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC104010.1-201ENST00000616889 150 ntBASIC3.82□□□□□ -1.8
CCDC196A0A1B0GTZ2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.82□□□□□ -1.8
CCDC196A0A1B0GTZ2 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC196A0A1B0GTZ2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC196A0A1B0GTZ2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 OR4G2P-202ENST00000641004 1759 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 DEFB108F-201ENST00000344638 222 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 SNORA71.3-201ENST00000362582 128 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 RNU1-70P-201ENST00000362618 164 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 MIR670-201ENST00000390142 98 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 RPL7P25-201ENST00000404151 721 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL591034.1-201ENST00000407447 340 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 NDUFB4P5-201ENST00000415445 361 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 USP9YP13-201ENST00000417797 480 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL390023.1-201ENST00000428836 262 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 RPL23AP69-201ENST00000431134 458 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 OR2B8P-201ENST00000432841 938 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 RPL23AP22-201ENST00000437556 453 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL162389.1-201ENST00000449233 177 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL049714.1-201ENST00000466686 347 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 HSPE1P6-201ENST00000479457 291 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 MTND4LP22-201ENST00000508209 276 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL359273.1-201ENST00000510918 627 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 RNU1-61P-201ENST00000516107 151 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 RNU6-1003P-201ENST00000517099 105 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC022616.6-201ENST00000520479 119 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 FAM60DP-201ENST00000524174 632 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 ZNF415P1-201ENST00000582279 1166 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL162713.1-201ENST00000604480 262 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC108747.1-201ENST00000609508 535 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC009159.1-201ENST00000618386 642 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC025048.6-202ENST00000627667 438 ntBASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC196A0A1B0GTZ2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 RNA5SP72-201ENST00000364442 117 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 RNU6-754P-201ENST00000391166 107 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 U3.42-201ENST00000408746 214 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 RNA5SP229-201ENST00000410809 99 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 RNA5SP107-201ENST00000411358 122 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 RPL27AP8-201ENST00000424277 446 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL049734.2-201ENST00000441066 616 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AP000936.2-201ENST00000447151 681 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC114967.1-201ENST00000504890 259 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC093534.1-201ENST00000504977 132 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC114797.1-201ENST00000514003 728 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC117532.1-201ENST00000514638 323 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL356057.1-201ENST00000533798 831 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 ACTR3BP3-201ENST00000565577 979 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC005951.2-201ENST00000576282 495 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC005951.1-201ENST00000576706 485 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 MIR4474-201ENST00000579189 78 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC110760.3-201ENST00000598794 467 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 CKS1BP3-201ENST00000600888 237 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC090970.3-201ENST00000612566 866 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL136313.1-201ENST00000624804 202 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL136164.4-201ENST00000625013 2135 ntBASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC196A0A1B0GTZ2 AC093010.3-201ENST00000570269 15214 ntBASIC3.79□□□□□ -1.8
CCDC196A0A1B0GTZ2 MTND4P4-201ENST00000439033 1366 ntBASIC3.79□□□□□ -1.8
CCDC196A0A1B0GTZ2 AL138713.1-201ENST00000624026 2130 ntBASIC3.79□□□□□ -1.8
CCDC196A0A1B0GTZ2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC196A0A1B0GTZ2 RNY3P10-201ENST00000384764 102 ntBASIC3.79□□□□□ -1.8
CCDC196A0A1B0GTZ2 U3.19-201ENST00000390893 196 ntBASIC3.79□□□□□ -1.8
CCDC196A0A1B0GTZ2 FCF1P10-201ENST00000407590 479 ntBASIC3.79□□□□□ -1.8
CCDC196A0A1B0GTZ2 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms