Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 RN7SKP226-201ENST00000364912 300 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AL355615.1-201ENST00000406187 641 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 BTF3P7-201ENST00000407097 488 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AL133264.1-201ENST00000407157 562 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AF274854.1-201ENST00000413236 615 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AL135786.1-201ENST00000415892 214 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AL121882.1-201ENST00000422893 417 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 PSMA6P3-201ENST00000428242 164 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 ATP5F1P1-201ENST00000433775 569 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC241584.1-201ENST00000438469 1241 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AL592447.1-201ENST00000447592 540 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 MTCO1P48-201ENST00000448024 1096 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC078857.1-201ENST00000469870 667 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC008427.1-201ENST00000503102 655 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC091860.1-201ENST00000505723 432 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC121161.1-201ENST00000510606 652 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 MRPS36P2-201ENST00000512569 299 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 HMGB1P1-201ENST00000522557 636 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AP000889.1-201ENST00000530968 660 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC090502.2-201ENST00000549267 280 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC008127.2-201ENST00000549925 1075 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC023824.2-201ENST00000566185 400 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 SNORD53-201ENST00000579969 78 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC015688.2-201ENST00000584523 262 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC105224.1-201ENST00000587055 421 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AP002906.1-201ENST00000603405 233 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AL449363.1-201ENST00000617815 186 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 MIR6132-201ENST00000622083 109 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC073308.1-201ENST00000623696 305 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 AC006020.1-201ENST00000420179 1854 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 XGY1-201ENST00000381172 446 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AL591416.1-201ENST00000404015 867 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AC027644.1-201ENST00000419595 298 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AL035407.1-201ENST00000429211 571 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AC024082.2-201ENST00000434771 238 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AL353718.1-201ENST00000451028 517 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 RFC5P1-201ENST00000454419 874 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AL139109.1-201ENST00000455491 297 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 RNU6-1282P-201ENST00000516735 96 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 RNU6-928P-201ENST00000516876 104 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 IGLV3-17-201ENST00000519099 244 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AC087241.2-201ENST00000535801 324 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AL512310.1-201ENST00000548639 172 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 SETP7-201ENST00000552169 453 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 MIR4666A-201ENST00000580160 79 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AC091946.2-201ENST00000606105 291 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AL590808.1-201ENST00000618696 141 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 MIR6873-201ENST00000622788 63 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AC010872.1-201ENST00000624225 675 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AC026634.1-201ENST00000634369 198 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 AL163152.1-201ENST00000642001 374 ntBASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV41A0A0B4J266 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV41A0A0B4J266 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
TRAV41A0A0B4J266 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV41A0A0B4J266 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.76□□□□□ -2.13
TRAV41A0A0B4J266 MIRLET7G-201ENST00000362280 84 ntBASIC1.76□□□□□ -2.13
TRAV41A0A0B4J266 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV41A0A0B4J266 MIR221-201ENST00000385135 110 ntBASIC1.76□□□□□ -2.13
TRAV41A0A0B4J266 RNU4-72P-201ENST00000410754 173 ntBASIC1.76□□□□□ -2.13
TRAV41A0A0B4J266 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV41A0A0B4J266 SEPT2P1-201ENST00000419651 180 ntBASIC1.76□□□□□ -2.13
TRAV41A0A0B4J266 MTCYBP32-201ENST00000427945 1084 ntBASIC1.76□□□□□ -2.13
TRAV41A0A0B4J266 AL356320.1-201ENST00000429616 163 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms