Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 RNA5SP295-201ENST00000362655 121 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 RNU1-140P-201ENST00000365040 165 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 U3.26-201ENST00000391236 204 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AP000567.1-201ENST00000406413 156 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 MTCO1P17-201ENST00000411522 491 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AC244098.2-201ENST00000422068 99 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 RPL7P52-201ENST00000449200 742 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 SNORA59A-201ENST00000459326 152 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AC116337.2-201ENST00000477662 156 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 COX7A2P2-201ENST00000505291 250 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 PSMA2P1-201ENST00000526365 646 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AP002404.1-201ENST00000532005 451 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 MTCYBP33-201ENST00000575007 1130 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 RSL24D1P11-201ENST00000591045 491 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AC073544.2-201ENST00000601155 540 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AL355812.1-201ENST00000603215 216 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AC112187.2-201ENST00000604345 283 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AC004853.1-201ENST00000604902 698 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AC004832.5-201ENST00000608677 401 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AC012360.2-201ENST00000609349 391 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 U73479.1-201ENST00000618062 168 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AC116096.1-201ENST00000566804 2314 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 AC008264.2-201ENST00000610193 3731 ntBASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSNK1G3Q9Y6M4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 MTND5P7-201ENST00000413558 1798 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AL161781.1-201ENST00000354277 403 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 Y_RNA.201-201ENST00000364052 96 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 SNORA51.2-201ENST00000364595 132 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 Y_RNA.436-201ENST00000384097 102 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 SNORA7.4-201ENST00000384249 137 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AL031121.1-201ENST00000406553 254 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 RN7SKP142-201ENST00000411236 328 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 MORF4L1P6-201ENST00000418771 268 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AC245291.1-201ENST00000419501 328 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AL513174.1-201ENST00000423182 629 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AC109583.1-201ENST00000432156 268 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 RPL37P21-201ENST00000435890 276 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 FTH1P1-201ENST00000437933 532 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 COX6CP2-201ENST00000444980 225 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 SNRPGP9-201ENST00000456025 225 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AP001486.1-201ENST00000463339 476 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AP000797.1-201ENST00000478870 387 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AL049873.1-201ENST00000480540 376 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AC010424.1-201ENST00000506336 297 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AC022447.1-201ENST00000515358 464 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 RNU1-103P-201ENST00000516502 125 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 MIR2276-201ENST00000516886 89 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 RNU6-714P-201ENST00000516963 103 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 AC034268.2-201ENST00000571784 482 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 SNRPGP15-201ENST00000600149 222 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 PRELID3BP8-201ENST00000604148 295 ntBASIC3.16□□□□□ -1.9
CSNK1G3Q9Y6M4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms