Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RPS18P6-201ENST00000476880 458 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 AC109925.1-201ENST00000478069 331 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 RN7SL184P-201ENST00000488308 297 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 AK3P2-201ENST00000507976 429 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 SNORA31.22-201ENST00000517204 135 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 AC109479.2-201ENST00000517842 174 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 OR7E18P-201ENST00000592589 702 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 AL078621.3-201ENST00000623707 2042 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 RNU6-858P-201ENST00000362436 107 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 RNU4-90P-201ENST00000362773 141 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 SNORD50.1-201ENST00000362987 71 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 RNU6-1020P-201ENST00000363684 107 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 RNA5SP30-201ENST00000365552 115 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 Y_RNA.405-201ENST00000383979 100 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 Y_RNA.451-201ENST00000384200 100 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 Y_RNA.524-201ENST00000384564 100 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 Y_RNA.561-201ENST00000384694 100 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 SNORD78.2-201ENST00000391076 69 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 RN7SL515P-201ENST00000463999 297 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 RNU6-615P-201ENST00000516065 106 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 Y_RNA.683-201ENST00000516508 93 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 RNU6-861P-201ENST00000516745 106 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 RNU6-612P-201ENST00000516909 102 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 IGKV2-38-201ENST00000517443 247 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 AC008694.2-201ENST00000517591 306 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 AC021678.3-201ENST00000517893 476 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 BNIP3P5-201ENST00000562290 498 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 MIR4643-201ENST00000577473 78 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 MIR1273E-201ENST00000581165 102 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 AC002545.1-201ENST00000592511 181 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 RPL23AP78-201ENST00000599928 470 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 AP001485.1-201ENST00000604799 199 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 AC072026.1-201ENST00000605023 201 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 SDR42E1P1-201ENST00000611327 477 ntBASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HRH3Q9Y5N1 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
HRH3Q9Y5N1 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
HRH3Q9Y5N1 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
HRH3Q9Y5N1 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.21□□□□□ -1.57
HRH3Q9Y5N1 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.21□□□□□ -1.58
HRH3Q9Y5N1 AL451142.2-201ENST00000429076 2090 ntBASIC5.21□□□□□ -1.58
HRH3Q9Y5N1 RNU6-682P-201ENST00000363843 106 ntBASIC5.21□□□□□ -1.58
HRH3Q9Y5N1 RNU6-512P-201ENST00000364438 103 ntBASIC5.21□□□□□ -1.58
HRH3Q9Y5N1 RN7SKP124-201ENST00000364730 341 ntBASIC5.21□□□□□ -1.58
HRH3Q9Y5N1 RNU6-290P-201ENST00000365212 101 ntBASIC5.21□□□□□ -1.58
HRH3Q9Y5N1 RNU6-493P-201ENST00000391321 108 ntBASIC5.21□□□□□ -1.58
HRH3Q9Y5N1 RNU6-1025P-201ENST00000410629 104 ntBASIC5.21□□□□□ -1.58
HRH3Q9Y5N1 DPPA2P3-201ENST00000411853 655 ntBASIC5.21□□□□□ -1.58
HRH3Q9Y5N1 AC016769.2-201ENST00000414815 475 ntBASIC5.21□□□□□ -1.58
HRH3Q9Y5N1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.21□□□□□ -1.58
HRH3Q9Y5N1 AL355433.1-201ENST00000422804 300 ntBASIC5.21□□□□□ -1.58
HRH3Q9Y5N1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HRH3Q9Y5N1 COX6CP14-201ENST00000469580 174 ntBASIC5.21□□□□□ -1.58
HRH3Q9Y5N1 IGLV3-24-201ENST00000517477 197 ntBASIC5.21□□□□□ -1.58
HRH3Q9Y5N1 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms