Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 snoU109.6-201ENST00000516831 118 ntBASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 AC109309.2-201ENST00000612597 332 ntBASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 MIR6811-201ENST00000620409 58 ntBASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AL035079.1-201ENST00000405210 287 ntBASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 RPL21P50-201ENST00000417698 477 ntBASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AL138785.1-201ENST00000425821 331 ntBASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AL391987.1-201ENST00000441025 200 ntBASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AC097463.1-201ENST00000447288 481 ntBASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AC009963.3-201ENST00000458090 486 ntBASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AC068228.1-201ENST00000461723 211 ntBASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 GM2AP2-201ENST00000491764 562 ntBASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AC004980.4-201ENST00000513375 203 ntBASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AP001328.1-201ENST00000528550 176 ntBASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AC006272.2-201ENST00000594725 163 ntBASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 U7.2-201ENST00000607576 63 ntBASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AC138965.3-201ENST00000623875 498 ntBASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AL132640.3-201ENST00000630473 177 ntBASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 AL731556.1-201ENST00000394628 3711 ntBASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA4Q9Y5G9 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 RNA5SP350-201ENST00000363298 111 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 RNU5E-7P-201ENST00000365290 117 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 RNU6-1286P-201ENST00000383871 107 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 RNA5SP56-201ENST00000410277 118 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 RN7SKP281-201ENST00000410472 352 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 RN7SKP284-201ENST00000411002 343 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 NDUFB4P7-201ENST00000423198 363 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 RPL12P16-201ENST00000431098 498 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 AP002453.1-201ENST00000492327 668 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 RNU2-56P-201ENST00000516826 190 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 RN7SKP277-201ENST00000516895 283 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 TRAV28-201ENST00000557548 323 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 RPSAP75-201ENST00000605848 301 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 U4.7-201ENST00000638126 106 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 AC099654.2-201ENST00000433031 1980 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 AL353743.1-202ENST00000431724 1695 ntBASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PCDHGA4Q9Y5G9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDHGA4Q9Y5G9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms