Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 EEF1A1P40-201ENST00000412883 573 ntBASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 GPR143P-201ENST00000434155 205 ntBASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 RPL31P13-201ENST00000484151 370 ntBASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 RNA5SP401-201ENST00000515920 127 ntBASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 Y_RNA.701-201ENST00000516812 110 ntBASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 AL158801.5-201ENST00000623123 465 ntBASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 MTND5P33-201ENST00000571250 1450 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 RNU6-223P-201ENST00000362830 107 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 RNU6-1097P-201ENST00000363586 107 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 RNU6-108P-201ENST00000365558 107 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 Y_RNA.460-201ENST00000384255 102 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 RNU6-1207P-201ENST00000384343 107 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 RNU6-1158P-201ENST00000391167 107 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 HDGFP1-201ENST00000405943 252 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 RNU6-1068P-201ENST00000410958 103 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 ATP5JP1-201ENST00000431631 322 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 RPL7P28-201ENST00000437739 740 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC016691.1-201ENST00000441321 413 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 RPS11P1-201ENST00000451072 473 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 CEACAMP4-201ENST00000457676 421 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 snoU13.8-201ENST00000458890 104 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 MTCO2P29-201ENST00000465212 189 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC092451.1-201ENST00000480211 153 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC068305.1-201ENST00000497406 726 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 SNORA40.12-201ENST00000516329 111 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 RNU6-1220P-201ENST00000517126 108 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 RNA5SP179-201ENST00000517284 121 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC024224.1-201ENST00000538284 609 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC243972.3-201ENST00000539655 198 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 ZNF192P1-203ENST00000565888 810 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 HMGB1P6-201ENST00000569046 646 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC007566.2-201ENST00000603642 413 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC135507.2-201ENST00000612443 309 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC009318.4-201ENST00000620496 486 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC090574.1-201ENST00000623186 233 ntBASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTDP1Q9Y5B0 AL353746.1-201ENST00000566293 6881 ntBASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 SNORA7.2-201ENST00000364446 145 ntBASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 SNORD81.2-201ENST00000365153 76 ntBASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 HSPE1P26-201ENST00000405341 275 ntBASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 MIR1251-201ENST00000408552 70 ntBASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 SNORA57.3-201ENST00000411095 141 ntBASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 AC012065.2-201ENST00000421295 375 ntBASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 RPL23AP30-201ENST00000432419 501 ntBASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 TBCAP1-201ENST00000436520 327 ntBASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 CBWD4P-201ENST00000445695 655 ntBASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 AC007677.1-201ENST00000445757 515 ntBASIC4.63□□□□□ -1.67
CTDP1Q9Y5B0 RPL7P52-201ENST00000449200 742 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms