Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RPS12P18-201ENST00000442381 270 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC112653.1-201ENST00000443851 386 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 MTCYBP3-201ENST00000445588 1137 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC034222.1-201ENST00000494052 532 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC106872.3-201ENST00000495104 446 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC111000.2-201ENST00000507775 550 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 GMPSP1-201ENST00000514075 579 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 HMGN1P28-201ENST00000521340 364 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 OR5G4P-201ENST00000525251 760 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 RPL23AP84-201ENST00000571193 464 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC136618.2-201ENST00000575091 400 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AL357094.1-201ENST00000603845 844 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC106791.2-201ENST00000604680 391 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC018714.1-201ENST00000605028 208 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC013476.2-201ENST00000614456 459 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC027309.3-201ENST00000623419 351 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC026422.1-201ENST00000623961 452 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC079597.1-201ENST00000624306 508 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.95□□□□□ -1.94
ATG4BQ9Y4P1 AC009902.3-201ENST00000606235 2172 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 RNU6-223P-201ENST00000362830 107 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 RNA5SP374-201ENST00000362939 125 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 RNU6-660P-201ENST00000364566 109 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 U3.20-201ENST00000390909 217 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 RPL23AP69-201ENST00000431134 458 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 TAAR7P-201ENST00000436141 242 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 RPL35AP22-201ENST00000436855 335 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 RSU1P2-202ENST00000437884 485 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 CYCSP32-201ENST00000440548 321 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 MTND5P2-201ENST00000442927 1142 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 AL606662.1-201ENST00000445763 553 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 AC091179.1-201ENST00000461606 579 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 RPL21P8-201ENST00000465083 535 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 AC004263.1-201ENST00000479327 332 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 AC068724.1-201ENST00000487100 792 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 AC012435.1-202ENST00000568772 240 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 ISCA1P3-201ENST00000577104 373 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 AC021171.1-201ENST00000603137 706 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 Z99289.3-201ENST00000605586 594 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 AC091304.6-201ENST00000619761 202 ntBASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.94□□□□□ -1.94
ATG4BQ9Y4P1 AC011460.1-201ENST00000636268 1834 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AC022336.2-201ENST00000568966 2538 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 RNU5E-8P-201ENST00000363502 116 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 U3.6-201ENST00000363622 211 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 SNORD15B-201ENST00000384714 146 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AC119751.3-201ENST00000399720 670 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 DPPA2P1-201ENST00000428060 556 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 MTND5P25-201ENST00000430499 799 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 UBE2FP3-201ENST00000436366 524 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AL831737.1-201ENST00000441288 271 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AC009237.8-201ENST00000445492 379 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AL139824.2-201ENST00000458731 1095 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 RNU6-420P-201ENST00000458780 107 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 RPL31P60-201ENST00000478450 367 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 RPS3AP43-201ENST00000479743 781 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AC114967.1-201ENST00000504890 259 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 RNU6-1282P-201ENST00000516735 96 ntBASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.93□□□□□ -1.94
ATG4BQ9Y4P1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms