Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 Y_RNA.493-201ENST00000384422 102 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 U3.20-201ENST00000390909 217 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 GSTA9P-201ENST00000406231 611 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 U3.39-201ENST00000408569 239 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC092447.6-201ENST00000414578 210 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 RPS7P15-201ENST00000415804 584 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 TOMM22P1-201ENST00000418578 312 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 PIGFP2-201ENST00000421400 651 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 USP9YP18-201ENST00000425912 695 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 ISCA1P6-201ENST00000427740 390 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 MTCO2P11-201ENST00000431069 680 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 FTH1P1-201ENST00000437933 532 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 MTCO2P3-201ENST00000442543 421 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC132479.1-201ENST00000449160 144 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 UBDP1-202ENST00000457888 382 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC013267.1-201ENST00000458227 267 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 U3.44-201ENST00000458938 192 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 RPL7P15-201ENST00000461190 712 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 RN7SL330P-201ENST00000469709 307 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC023598.1-201ENST00000472521 361 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 RPS3AP17-201ENST00000472594 777 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 HMGB1P29-201ENST00000505659 499 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 ARL4AP2-201ENST00000507378 601 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 NPM1P41-201ENST00000512920 831 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 RNU6-579P-201ENST00000516879 102 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC093331.1-201ENST00000521474 169 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 DEFB108A-201ENST00000530110 222 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AL391840.1-201ENST00000571144 367 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 MIR3186-201ENST00000577404 85 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 MIR3167-201ENST00000579623 85 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 MIR3682-201ENST00000581338 84 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 NRBF2P1-201ENST00000587407 859 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC093227.2-201ENST00000589357 285 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AL391646.1-201ENST00000603860 190 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC067959.1-201ENST00000604334 379 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC011816.2-201ENST00000607089 556 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC110994.2-201ENST00000635481 492 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AL672296.1-201ENST00000427780 2158 ntBASIC3.09□□□□□ -1.91
MRPS28Q9Y2Q9 AC011460.1-201ENST00000636268 1834 ntBASIC3.09□□□□□ -1.92
MRPS28Q9Y2Q9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
MRPS28Q9Y2Q9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 AC007256.1-201ENST00000392253 2765 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 RNU6-97P-201ENST00000363387 104 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 RNU6-263P-201ENST00000363811 107 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 Y_RNA.248-201ENST00000364501 109 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 RNU1-64P-201ENST00000365443 163 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 RNA5SP283-201ENST00000365604 119 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 RNU6-1181P-201ENST00000384191 106 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 MIR19A-201ENST00000384878 82 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 RNU6-821P-201ENST00000390995 107 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 RNU6-780P-201ENST00000391030 104 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 MTND1P23-201ENST00000416931 372 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 AC068533.1-201ENST00000418542 415 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 AC069157.1-201ENST00000421749 137 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 ISCA1P1-201ENST00000426679 387 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 MTCO2P19-201ENST00000427513 598 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 RPL31P35-201ENST00000431058 377 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 AL451074.3-201ENST00000437709 472 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 AC112653.1-201ENST00000443851 386 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 HMGB3P8-201ENST00000449709 577 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 C1DP4-201ENST00000455429 424 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 AL121769.1-201ENST00000469473 401 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 RPS3AP14-201ENST00000483907 780 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 VN1R105P-201ENST00000486595 910 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 AL139099.1-201ENST00000497398 403 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 SAP18P1-201ENST00000512058 390 ntBASIC3.08□□□□□ -1.92
MRPS28Q9Y2Q9 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms