Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.06□□□□□ -1.92
SMC3Q9UQE7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.06□□□□□ -1.92
SMC3Q9UQE7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SMC3Q9UQE7 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.06□□□□□ -1.92
SMC3Q9UQE7 AC093536.2-201ENST00000565257 1406 ntBASIC3.06□□□□□ -1.92
SMC3Q9UQE7 AGGF1P5-201ENST00000567900 919 ntBASIC3.06□□□□□ -1.92
SMC3Q9UQE7 AC105224.1-201ENST00000587055 421 ntBASIC3.06□□□□□ -1.92
SMC3Q9UQE7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.06□□□□□ -1.92
SMC3Q9UQE7 AC069304.2-201ENST00000605154 435 ntBASIC3.06□□□□□ -1.92
SMC3Q9UQE7 AC093732.2-201ENST00000607950 274 ntBASIC3.06□□□□□ -1.92
SMC3Q9UQE7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.06□□□□□ -1.92
SMC3Q9UQE7 AL442067.2-201ENST00000614033 363 ntBASIC3.06□□□□□ -1.92
SMC3Q9UQE7 AL161629.2-201ENST00000615347 275 ntBASIC3.06□□□□□ -1.92
SMC3Q9UQE7 AL121895.2-201ENST00000619558 447 ntBASIC3.06□□□□□ -1.92
SMC3Q9UQE7 LINC02211-204ENST00000642024 1070 ntBASIC3.06□□□□□ -1.92
SMC3Q9UQE7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMC3Q9UQE7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.06□□□□□ -1.92
SMC3Q9UQE7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SMC3Q9UQE7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.05□□□□□ -1.92
SMC3Q9UQE7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SMC3Q9UQE7 SNORD116.1-201ENST00000365628 92 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 RNU6-1122P-201ENST00000384449 107 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 RNU2-43P-201ENST00000410306 190 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 MTCO2P8-201ENST00000412213 658 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.05□□□□□ -1.92
SMC3Q9UQE7 RPL23AP76-201ENST00000441860 458 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AL353691.1-201ENST00000451332 387 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 MTCO3P11-201ENST00000455103 774 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AC126182.1-201ENST00000478134 357 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.05□□□□□ -1.92
SMC3Q9UQE7 RPL30P5-201ENST00000494923 336 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 GTF2IP9-201ENST00000502460 301 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AC114981.1-201ENST00000503897 678 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.05□□□□□ -1.92
SMC3Q9UQE7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.05□□□□□ -1.92
SMC3Q9UQE7 VN1R104P-201ENST00000505115 1009 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.05□□□□□ -1.92
SMC3Q9UQE7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AC008837.2-201ENST00000513076 418 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 MTATP6P9-201ENST00000515039 680 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.05□□□□□ -1.92
SMC3Q9UQE7 HMGB1P14-201ENST00000557424 591 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AL132657.2-201ENST00000564417 358 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 MIR4509-3-201ENST00000578671 94 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.05□□□□□ -1.92
SMC3Q9UQE7 MIR4509-2-201ENST00000583920 94 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AC243773.3-201ENST00000613270 256 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AL050303.3-201ENST00000613704 284 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 MIR4509-1-201ENST00000618224 94 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AC006386.1-201ENST00000619436 415 ntBASIC3.05□□□□□ -1.92
SMC3Q9UQE7 AC097714.1-201ENST00000511272 1647 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 DEFA7P-201ENST00000382676 285 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 TAS2R15P-201ENST00000390674 928 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 ANAPC10P1-201ENST00000395991 556 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 AL590084.1-201ENST00000407885 387 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 NANOGP5-201ENST00000424456 877 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 RPS24P13-201ENST00000442520 397 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 RPS3AP12-201ENST00000443616 753 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 AC005297.2-201ENST00000450430 606 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 AC005410.1-202ENST00000460347 485 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 RPL23AP70-201ENST00000483361 460 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 AC091951.3-201ENST00000504093 246 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 CKS1BP7-201ENST00000522230 235 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 ACTR3BP3-201ENST00000565577 979 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 MIR5092-201ENST00000583139 88 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 AC025588.4-201ENST00000615802 908 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 AC011330.2-201ENST00000621680 635 ntBASIC3.04□□□□□ -1.92
SMC3Q9UQE7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SMC3Q9UQE7 SET-203ENST00000372688 801 ntTSL 2 BASIC3.03□□□□□ -1.92
SMC3Q9UQE7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SMC3Q9UQE7 AL356131.1-201ENST00000405826 414 ntBASIC3.03□□□□□ -1.92
SMC3Q9UQE7 MIR1290-201ENST00000408735 78 ntBASIC3.03□□□□□ -1.92
SMC3Q9UQE7 AL592310.1-201ENST00000414330 671 ntBASIC3.03□□□□□ -1.92
SMC3Q9UQE7 RPLP0P7-201ENST00000416050 667 ntBASIC3.03□□□□□ -1.92
SMC3Q9UQE7 MTATP6P27-201ENST00000416987 621 ntBASIC3.03□□□□□ -1.92
SMC3Q9UQE7 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.03□□□□□ -1.92
SMC3Q9UQE7 AC007742.1-201ENST00000425789 329 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms