Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 Z82190.1-201ENST00000454534 490 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 HMGB1P36-201ENST00000487709 576 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC093278.1-201ENST00000494700 600 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC093663.1-201ENST00000497190 394 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 NDUFB4P2-201ENST00000509515 391 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 RNU6-1095P-201ENST00000516148 108 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC118273.2-201ENST00000532092 465 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 CR383656.7-201ENST00000548164 174 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AL121603.1-201ENST00000553815 142 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC090578.1-201ENST00000604955 591 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 LARP7P1-201ENST00000605576 316 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC008250.2-201ENST00000615261 205 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC104010.1-201ENST00000616889 150 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 Y_RNA.256-201ENST00000364594 104 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 Y_RNA.500-201ENST00000384466 111 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AL359704.1-201ENST00000411586 781 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 MTCO3P12-201ENST00000416718 547 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 HMGB3P20-201ENST00000417997 600 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AL137014.1-201ENST00000420490 1226 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 BEND7P1-201ENST00000422058 457 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 Z99127.3-201ENST00000448158 395 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AC006480.1-201ENST00000449887 378 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 ANP32BP2-201ENST00000454525 545 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 RPL23AP41-201ENST00000484754 458 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 FCF1P3-201ENST00000496394 590 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 FAM92A1P2-202ENST00000504766 877 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 Vault.1-201ENST00000516474 102 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 RNU6-430P-201ENST00000517078 107 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AC022878.1-201ENST00000530684 149 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AC137800.2-201ENST00000574375 120 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AC091135.1-201ENST00000585943 307 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AL451007.1-201ENST00000595491 289 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AC006254.3-201ENST00000603353 884 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AC112191.3-201ENST00000604371 277 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AL161729.4-201ENST00000604650 476 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AP001506.1-201ENST00000615444 211 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AL158209.2-201ENST00000619266 216 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AC124864.2-201ENST00000624736 186 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 AC009902.3-201ENST00000606235 2172 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 ZNF807-201ENST00000328088 1707 ntBASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
SCAF8Q9UPN6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 AC116096.1-201ENST00000566804 2314 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 LINC02471-203ENST00000641941 4752 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 RNU6-335P-201ENST00000364563 113 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 MIR513A2-201ENST00000385249 127 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 RPS3AP24-201ENST00000407896 734 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 AC063979.1-201ENST00000415539 377 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 AC000111.3-201ENST00000433478 193 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 HMGN2P21-201ENST00000447764 270 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 AL590365.1-201ENST00000450788 243 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 SNORA18.6-201ENST00000516792 115 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 RNU6-201P-201ENST00000517100 61 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 MIR5680-201ENST00000577577 84 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 AC103710.1-201ENST00000610003 901 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 AL590099.1-201ENST00000615276 138 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 AC011460.1-201ENST00000636268 1834 ntBASIC4.2□□□□□ -1.74
SCAF8Q9UPN6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms