Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AP005403.1-201ENST00000579720 229 ntBASIC5.8□□□□□ -1.48
PCDHGC3Q9UN70 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGC3Q9UN70 SNORD84-203ENST00000584275 78 ntBASIC5.8□□□□□ -1.48
PCDHGC3Q9UN70 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGC3Q9UN70 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGC3Q9UN70 AP001485.1-201ENST00000604799 199 ntBASIC5.8□□□□□ -1.48
PCDHGC3Q9UN70 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGC3Q9UN70 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGC3Q9UN70 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGC3Q9UN70 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGC3Q9UN70 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGC3Q9UN70 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGC3Q9UN70 AC026951.1-201ENST00000559530 2459 ntBASIC5.8□□□□□ -1.48
PCDHGC3Q9UN70 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGC3Q9UN70 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 AC125336.1-201ENST00000508893 2827 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 MIR133A2-201ENST00000347538 102 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 RNU6-512P-201ENST00000364438 103 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 RNU6-178P-201ENST00000384631 104 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 RNU6-493P-201ENST00000391321 108 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 Y_RNA.626-201ENST00000411288 95 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 RN7SKP293-201ENST00000411389 296 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 EIF1P2-201ENST00000428233 350 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 CFL1P1-202ENST00000432948 411 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 RPL23AP45-201ENST00000476406 468 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 RNU6-1012P-201ENST00000516606 109 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 AC025755.1-201ENST00000521306 278 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 AL359219.2-201ENST00000555184 348 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 AC025884.1-201ENST00000556034 378 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 AC037487.3-201ENST00000606668 112 ntBASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGC3Q9UN70 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 RNU6-1167P-201ENST00000363227 94 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 RN7SKP227-201ENST00000364445 330 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 SNORA70.6-201ENST00000383934 134 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 SNORD63-201ENST00000384262 68 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 AC017079.2-201ENST00000416102 485 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 AC093655.2-201ENST00000425735 631 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 MTATP6P4-201ENST00000427725 675 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 AL358472.1-201ENST00000431295 329 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 MTCO1P5-201ENST00000433573 344 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 GEMIN8P3-201ENST00000445417 720 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 AC104164.2-201ENST00000496953 495 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 Y_RNA.662-201ENST00000516028 97 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 EDDM3DP-201ENST00000554692 434 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 AP000769.2-201ENST00000602344 396 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 AL139395.1-201ENST00000603662 160 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 AL078621.3-201ENST00000623707 2042 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 AL691477.1-201ENST00000624398 162 ntBASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
PCDHGC3Q9UN70 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGC3Q9UN70 AC107027.3-201ENST00000565095 3473 ntBASIC5.77□□□□□ -1.49
PCDHGC3Q9UN70 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms