Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC116618.1-201ENST00000634617 774 ntBASIC1.55□□□□□ -2.16
COMMD3Q9UBI1 DDX10P1-201ENST00000448545 1933 ntBASIC1.55□□□□□ -2.16
COMMD3Q9UBI1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
COMMD3Q9UBI1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 RNU6-441P-201ENST00000384545 106 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 MIR676-201ENST00000390702 67 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 RNA5SP80-201ENST00000410475 111 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 UBE2V1P9-201ENST00000414760 368 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 IFNA20P-201ENST00000436840 528 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AC104073.1-201ENST00000451988 151 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 RNU6-420P-201ENST00000458780 107 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 MTND4LP3-201ENST00000468320 276 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 RPL7P18-201ENST00000478965 734 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 KATNBL1P4-201ENST00000503545 918 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AC023141.11-201ENST00000508864 202 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AP005902.1-201ENST00000521358 186 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 BNIP3P22-201ENST00000593399 556 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AC055876.5-201ENST00000605667 259 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AC007998.5-201ENST00000622938 237 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AC040168.1-201ENST00000623594 991 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AL109659.3-201ENST00000624985 950 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 AC111188.2-201ENST00000529697 1387 ntBASIC1.54□□□□□ -2.16
COMMD3Q9UBI1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 RNU6-444P-201ENST00000383988 108 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 AL079342.1-201ENST00000401460 267 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 RNU2-2P-201ENST00000410396 191 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 SNORD56-201ENST00000413522 71 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 GTF2IP20-201ENST00000431663 360 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 AC010881.1-201ENST00000433830 235 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 USP9YP15-201ENST00000442391 422 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 CABYRP1-201ENST00000465493 1045 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 AL136360.1-201ENST00000503377 1900 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 AC114781.4-201ENST00000513707 639 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 AC074029.2-201ENST00000551045 634 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 AC135628.1-201ENST00000568867 534 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 SUMO2P14-201ENST00000604488 293 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 AL450336.1-201ENST00000605180 586 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 U2.15-201ENST00000611544 191 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 U2.16-201ENST00000613119 191 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 AL161423.1-201ENST00000613700 262 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 U2.12-201ENST00000613778 191 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 U2.20-201ENST00000613956 192 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 U2.9-201ENST00000615427 191 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 U2.11-201ENST00000616345 191 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 U2.2-201ENST00000616535 191 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 U2.3-201ENST00000617785 191 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 U2.19-201ENST00000618602 191 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 RNU2-1-201ENST00000618664 191 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 U2.6-201ENST00000619225 191 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 U2.5-201ENST00000619465 191 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 AC109809.1-201ENST00000619665 545 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 U2.10-201ENST00000620268 191 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 MIR219B-201ENST00000637023 88 ntBASIC1.53□□□□□ -2.16
COMMD3Q9UBI1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.52□□□□□ -2.17
COMMD3Q9UBI1 RNU4-23P-201ENST00000362839 140 ntBASIC1.52□□□□□ -2.17
COMMD3Q9UBI1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
COMMD3Q9UBI1 RNU6-1151P-201ENST00000384684 107 ntBASIC1.52□□□□□ -2.17
COMMD3Q9UBI1 RNU2-17P-201ENST00000410290 190 ntBASIC1.52□□□□□ -2.17
COMMD3Q9UBI1 RNU6-272P-201ENST00000411028 104 ntBASIC1.52□□□□□ -2.17
COMMD3Q9UBI1 Z85994.2-201ENST00000434327 452 ntBASIC1.52□□□□□ -2.17
COMMD3Q9UBI1 FABP5P3-201ENST00000437960 408 ntBASIC1.52□□□□□ -2.17
COMMD3Q9UBI1 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.52□□□□□ -2.17
COMMD3Q9UBI1 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.52□□□□□ -2.17
COMMD3Q9UBI1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.52□□□□□ -2.17
COMMD3Q9UBI1 VPS26AP1-201ENST00000483197 979 ntBASIC1.52□□□□□ -2.17
COMMD3Q9UBI1 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.52□□□□□ -2.17
COMMD3Q9UBI1 AC105252.1-201ENST00000503089 286 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms