Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU1-35P-201ENST00000362782 153 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 RNU6-76P-201ENST00000384060 104 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 RNU6-1207P-201ENST00000384343 107 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 SNORA1.3-201ENST00000384676 136 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 MIR512-1-201ENST00000384913 84 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 ANAPC10P1-201ENST00000395991 556 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 RPS4XP3-201ENST00000398541 413 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AL356421.1-201ENST00000403255 413 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 RNA5SP344-201ENST00000411081 104 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AL592148.1-201ENST00000413568 445 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC083875.1-201ENST00000419509 405 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 SETP8-201ENST00000435341 628 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC090774.1-201ENST00000435925 246 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 RPL26P6-201ENST00000440913 438 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 TRIM60P18-201ENST00000441518 828 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 FGF7P5-201ENST00000441829 291 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 EEF1E1P1-201ENST00000446998 430 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 MTND1P9-201ENST00000453775 944 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AL049714.1-201ENST00000466686 347 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 UBE2DNL-203ENST00000474922 222 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC109464.2-201ENST00000510242 943 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 RNU6-711P-201ENST00000517255 106 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC239860.2-201ENST00000525886 270 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 MTCO2P15-201ENST00000532655 656 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC087465.1-201ENST00000560574 245 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 MIR3162-201ENST00000581818 82 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 RPL12P50-201ENST00000603116 116 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC007619.2-201ENST00000605743 379 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC010338.1-201ENST00000621823 717 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC007998.5-201ENST00000622938 237 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AP002782.1-201ENST00000623107 614 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AP003485.2-201ENST00000623636 610 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 AC084035.1-201ENST00000634543 607 ntBASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLCF1Q9UBD9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 RNU6-462P-201ENST00000362659 105 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 RNU6-289P-201ENST00000364093 107 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 SNORA4.1-201ENST00000364263 144 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 RNU6-1078P-201ENST00000364522 103 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 Y_RNA.500-201ENST00000384466 111 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 MIR513B-201ENST00000385136 84 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 SNORA26.7-201ENST00000391288 122 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AL360182.1-201ENST00000397433 468 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 MIR887-201ENST00000401258 79 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AL138827.1-201ENST00000402666 306 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 RNU6-757P-201ENST00000410334 100 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 RNA5SP184-201ENST00000411071 108 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 NUP35P1-201ENST00000422734 947 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 USP9YP36-201ENST00000424581 829 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AL606517.1-201ENST00000446914 387 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AL590664.1-201ENST00000448065 339 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 RPL36AP33-201ENST00000450395 310 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AL359385.1-201ENST00000456509 365 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 RPS26P21-201ENST00000475397 348 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 RPL30P14-201ENST00000482744 348 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AC021382.1-201ENST00000483523 359 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 SNORA31.1-201ENST00000515993 133 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 SNORA31.5-201ENST00000516190 133 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AC125611.2-201ENST00000551907 647 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AC011260.1-201ENST00000578420 472 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AL391001.1-201ENST00000602747 715 ntBASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.49□□□□□ -2.01
CLCF1Q9UBD9 RNU6-88P-201ENST00000606801 100 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms