Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.28□□□□□ -2.2
CHD7Q9P2D1 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.28□□□□□ -2.2
CHD7Q9P2D1 UBE2V1P13-201ENST00000436983 439 ntBASIC1.28□□□□□ -2.2
CHD7Q9P2D1 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.28□□□□□ -2.2
CHD7Q9P2D1 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.28□□□□□ -2.2
CHD7Q9P2D1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CHD7Q9P2D1 AP000560.1-201ENST00000624150 1937 ntBASIC1.28□□□□□ -2.2
CHD7Q9P2D1 AC018630.2-201ENST00000534866 2403 ntBASIC1.28□□□□□ -2.2
CHD7Q9P2D1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
CHD7Q9P2D1 HSPE1P26-201ENST00000405341 275 ntBASIC1.28□□□□□ -2.2
CHD7Q9P2D1 SUMO2P12-201ENST00000405924 140 ntBASIC1.28□□□□□ -2.2
CHD7Q9P2D1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.28□□□□□ -2.2
CHD7Q9P2D1 AC092832.1-201ENST00000422934 400 ntBASIC1.28□□□□□ -2.2
CHD7Q9P2D1 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.28□□□□□ -2.2
CHD7Q9P2D1 AC005534.2-201ENST00000431047 433 ntBASIC1.28□□□□□ -2.2
CHD7Q9P2D1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.28□□□□□ -2.2
CHD7Q9P2D1 AC012181.1-201ENST00000479895 423 ntBASIC1.28□□□□□ -2.2
CHD7Q9P2D1 AC092451.1-201ENST00000480211 153 ntBASIC1.28□□□□□ -2.2
CHD7Q9P2D1 AC006499.2-201ENST00000513470 337 ntBASIC1.28□□□□□ -2.2
CHD7Q9P2D1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.28□□□□□ -2.2
CHD7Q9P2D1 AC007229.1-201ENST00000590455 412 ntBASIC1.28□□□□□ -2.2
CHD7Q9P2D1 AP002907.1-201ENST00000606361 1430 ntBASIC1.27□□□□□ -2.21
CHD7Q9P2D1 AL445183.3-201ENST00000414168 502 ntBASIC1.27□□□□□ -2.21
CHD7Q9P2D1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.27□□□□□ -2.21
CHD7Q9P2D1 SNRPFP3-201ENST00000457792 225 ntBASIC1.27□□□□□ -2.21
CHD7Q9P2D1 CBX3P8-201ENST00000532412 525 ntBASIC1.27□□□□□ -2.21
CHD7Q9P2D1 AC092451.2-201ENST00000538746 658 ntBASIC1.27□□□□□ -2.21
CHD7Q9P2D1 AC083899.3-201ENST00000603413 594 ntBASIC1.27□□□□□ -2.21
CHD7Q9P2D1 RNU1-148P-201ENST00000384472 162 ntBASIC1.27□□□□□ -2.21
CHD7Q9P2D1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CHD7Q9P2D1 AC023424.2-201ENST00000493479 777 ntBASIC1.27□□□□□ -2.21
CHD7Q9P2D1 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.27□□□□□ -2.21
CHD7Q9P2D1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CHD7Q9P2D1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
CHD7Q9P2D1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CHD7Q9P2D1 SUMO1P4-201ENST00000429430 302 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 FTH1P12-201ENST00000432137 551 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.26□□□□□ -2.21
CHD7Q9P2D1 RPL37P25-201ENST00000507308 276 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.26□□□□□ -2.21
CHD7Q9P2D1 AC073413.2-201ENST00000604332 360 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 AC097468.3-201ENST00000607956 456 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CHD7Q9P2D1 U3.40-201ENST00000408706 208 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 RPL31P2-201ENST00000413849 377 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 RPL30P3-201ENST00000424262 333 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 AL583843.1-201ENST00000456070 346 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
CHD7Q9P2D1 SEM1P1-201ENST00000506694 209 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.26□□□□□ -2.21
CHD7Q9P2D1 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
CHD7Q9P2D1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.26□□□□□ -2.21
CHD7Q9P2D1 AL109653.1-201ENST00000603091 248 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 AL356118.1-201ENST00000635272 1078 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.26□□□□□ -2.21
CHD7Q9P2D1 AC007256.1-201ENST00000392253 2765 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 HMGB1P5-201ENST00000255320 642 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 RNU1-133P-201ENST00000364867 167 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 CYCSP48-201ENST00000417124 323 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 ARL5AP3-201ENST00000439327 386 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.26□□□□□ -2.21
CHD7Q9P2D1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.26□□□□□ -2.21
CHD7Q9P2D1 OR4V1P-201ENST00000525394 1140 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 AC006338.1-201ENST00000618453 749 ntBASIC1.26□□□□□ -2.21
CHD7Q9P2D1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CHD7Q9P2D1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.25□□□□□ -2.21
CHD7Q9P2D1 RNU6-1132P-201ENST00000459214 107 ntBASIC1.25□□□□□ -2.21
CHD7Q9P2D1 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.25□□□□□ -2.21
CHD7Q9P2D1 AC105313.1-201ENST00000509121 353 ntBASIC1.25□□□□□ -2.21
CHD7Q9P2D1 AP004242.1-201ENST00000533701 349 ntBASIC1.25□□□□□ -2.21
CHD7Q9P2D1 SUB1P4-201ENST00000566062 339 ntBASIC1.25□□□□□ -2.21
CHD7Q9P2D1 AC123912.5-201ENST00000605470 343 ntBASIC1.25□□□□□ -2.21
CHD7Q9P2D1 AC103810.8-201ENST00000607347 118 ntBASIC1.25□□□□□ -2.21
CHD7Q9P2D1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
CHD7Q9P2D1 AC008133.2-201ENST00000624540 351 ntBASIC1.25□□□□□ -2.21
CHD7Q9P2D1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CHD7Q9P2D1 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.25□□□□□ -2.21
CHD7Q9P2D1 FABP5P3-201ENST00000437960 408 ntBASIC1.25□□□□□ -2.21
CHD7Q9P2D1 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.25□□□□□ -2.21
CHD7Q9P2D1 MTCYBP35-201ENST00000503630 1137 ntBASIC1.25□□□□□ -2.21
CHD7Q9P2D1 AC118942.1-201ENST00000529674 1035 ntBASIC1.25□□□□□ -2.21
CHD7Q9P2D1 SETP2-201ENST00000553886 926 ntBASIC1.25□□□□□ -2.21
CHD7Q9P2D1 MIR4446-201ENST00000578505 67 ntBASIC1.25□□□□□ -2.21
CHD7Q9P2D1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.25□□□□□ -2.21
CHD7Q9P2D1 HSPE1P14-201ENST00000605812 302 ntBASIC1.25□□□□□ -2.21
CHD7Q9P2D1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.24□□□□□ -2.21
CHD7Q9P2D1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.24□□□□□ -2.21
CHD7Q9P2D1 MIR3973-201ENST00000579824 107 ntBASIC1.24□□□□□ -2.21
CHD7Q9P2D1 MIR5694-201ENST00000581190 76 ntBASIC1.24□□□□□ -2.21
CHD7Q9P2D1 AL133393.1-201ENST00000603277 287 ntBASIC1.24□□□□□ -2.21
CHD7Q9P2D1 AC090970.3-201ENST00000612566 866 ntBASIC1.24□□□□□ -2.21
CHD7Q9P2D1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
CHD7Q9P2D1 RNU6-716P-201ENST00000365621 103 ntBASIC1.24□□□□□ -2.21
CHD7Q9P2D1 MIR193B-201ENST00000384907 83 ntBASIC1.24□□□□□ -2.21
CHD7Q9P2D1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.24□□□□□ -2.21
CHD7Q9P2D1 RPS15AP7-201ENST00000439294 405 ntBASIC1.24□□□□□ -2.21
CHD7Q9P2D1 VN1R96P-201ENST00000446052 858 ntBASIC1.24□□□□□ -2.21
CHD7Q9P2D1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
CHD7Q9P2D1 uc_338.20-201ENST00000621563 178 ntBASIC1.24□□□□□ -2.21
CHD7Q9P2D1 AC022513.1-201ENST00000624512 117 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms