Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.78□□□□□ -1.81
LRFN1Q9P244 CUL1P1-201ENST00000509510 2425 ntBASIC3.78□□□□□ -1.81
LRFN1Q9P244 MAPK10-372ENST00000641954 3413 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LRFN1Q9P244 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN1Q9P244 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
LRFN1Q9P244 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN1Q9P244 RNA5SP295-201ENST00000362655 121 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 RNU6-1097P-201ENST00000363586 107 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 SNORD74.4-201ENST00000364129 80 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 SMIM11P1-201ENST00000369586 178 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 RNU6-701P-201ENST00000384059 107 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 RNU4-6P-201ENST00000410804 122 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 RN7SKP53-201ENST00000411337 315 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN1Q9P244 AL691449.1-201ENST00000426570 421 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 GPR143P-201ENST00000434155 205 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 RPL36AP6-201ENST00000435770 321 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 RPS29P7-201ENST00000439662 171 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 AL356535.1-201ENST00000440335 398 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 RPS4XP4-201ENST00000443195 763 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 AC079781.2-201ENST00000446424 169 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 ANP32BP2-201ENST00000454525 545 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.77□□□□□ -1.81
LRFN1Q9P244 AC079804.1-201ENST00000461922 436 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 AC087588.1-201ENST00000462203 316 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 RPL29P14-201ENST00000495837 428 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 HMGB1P29-201ENST00000505659 499 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.77□□□□□ -1.81
LRFN1Q9P244 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.77□□□□□ -1.81
LRFN1Q9P244 RNU6-352P-201ENST00000516908 107 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 RNU6-410P-201ENST00000517006 107 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
LRFN1Q9P244 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.77□□□□□ -1.81
LRFN1Q9P244 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.77□□□□□ -1.81
LRFN1Q9P244 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.77□□□□□ -1.81
LRFN1Q9P244 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.77□□□□□ -1.81
LRFN1Q9P244 AL606490.9-201ENST00000603331 271 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 AL031666.3-201ENST00000609320 1006 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 MIR7151-201ENST00000617477 60 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
LRFN1Q9P244 AC138649.3-201ENST00000622154 254 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN1Q9P244 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN1Q9P244 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
LRFN1Q9P244 AL136164.4-201ENST00000625013 2135 ntBASIC3.77□□□□□ -1.81
LRFN1Q9P244 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.77□□□□□ -1.81
LRFN1Q9P244 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN1Q9P244 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN1Q9P244 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN1Q9P244 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN1Q9P244 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 Y_RNA.3-201ENST00000362331 103 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 RN7SKP226-201ENST00000364912 300 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 Y_RNA.296-201ENST00000364930 108 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 SNORA70.4-201ENST00000365509 134 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN1Q9P244 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN1Q9P244 GSTA9P-201ENST00000406231 611 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 AC104651.1-201ENST00000427559 735 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 RPL23AP89-201ENST00000439324 255 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 NANOGNBP1-201ENST00000448444 480 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 RNA5SP310-201ENST00000459084 116 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 AL117351.2-201ENST00000513571 157 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 IFITM8P-201ENST00000522529 394 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 CASP1P1-201ENST00000526345 212 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 ATP5F1P5-201ENST00000526403 760 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 AC022690.1-201ENST00000526681 550 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN1Q9P244 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 AC024220.1-201ENST00000603675 484 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 DPPA3P3-201ENST00000603842 430 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 AL022154.1-201ENST00000604698 785 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN1Q9P244 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 AC073534.2-201ENST00000620377 381 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 AC105074.1-201ENST00000623380 3095 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.76□□□□□ -1.81
LRFN1Q9P244 AC007785.2-201ENST00000598627 1916 ntBASIC3.76□□□□□ -1.81
LRFN1Q9P244 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LRFN1Q9P244 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
LRFN1Q9P244 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms