Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 AC111188.2-201ENST00000529697 1387 ntBASIC1.82□□□□□ -2.12
CCDC88CQ9P219 AC010680.1-201ENST00000590024 3590 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 RNU1-17P-201ENST00000363022 152 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 MIR583-201ENST00000384846 75 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 MT-TC-201ENST00000387405 66 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 SSXP10-201ENST00000402595 565 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 MIR1323-201ENST00000408090 73 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 RNU4-27P-201ENST00000410889 139 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 RPL36P19-201ENST00000430744 301 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 AL031659.1-201ENST00000447075 539 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 MTND2P6-201ENST00000455337 1030 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 NAP1L1P3-201ENST00000462291 880 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 AC015724.1-201ENST00000478577 156 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 RPL38P4-201ENST00000502376 214 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 OR5BM1P-201ENST00000512021 366 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 AC104229.1-201ENST00000561364 255 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 AC006329.2-201ENST00000611491 394 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 AL163051.2-201ENST00000618976 735 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 AL360181.4-201ENST00000621752 134 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 ZNF519P1-201ENST00000449011 1626 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 AL596028.1-201ENST00000326971 197 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 SNORA6-201ENST00000384033 151 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 Y_RNA.595-201ENST00000410403 105 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 RPS29P11-201ENST00000496507 171 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 CDC42P4-201ENST00000510507 563 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 OR4P1P-201ENST00000530808 1136 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 AL356280.1-201ENST00000603614 379 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 MIR6840-201ENST00000611937 71 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 MIR6132-201ENST00000622083 109 ntBASIC1.81□□□□□ -2.12
CCDC88CQ9P219 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC88CQ9P219 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 AC011460.1-201ENST00000636268 1834 ntBASIC1.8□□□□□ -2.12
CCDC88CQ9P219 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 AL356292.1-201ENST00000283110 373 ntBASIC1.8□□□□□ -2.12
CCDC88CQ9P219 AL161781.1-201ENST00000354277 403 ntBASIC1.8□□□□□ -2.12
CCDC88CQ9P219 RNU6-1159P-201ENST00000362933 107 ntBASIC1.8□□□□□ -2.12
CCDC88CQ9P219 RNU6-650P-201ENST00000365658 111 ntBASIC1.8□□□□□ -2.12
CCDC88CQ9P219 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 RNU6-444P-201ENST00000383988 108 ntBASIC1.8□□□□□ -2.12
CCDC88CQ9P219 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 HMGN2P38-201ENST00000423806 265 ntBASIC1.8□□□□□ -2.12
CCDC88CQ9P219 MTND4LP10-201ENST00000435146 291 ntBASIC1.8□□□□□ -2.12
CCDC88CQ9P219 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 AL139109.1-201ENST00000455491 297 ntBASIC1.8□□□□□ -2.12
CCDC88CQ9P219 snoU13.23-201ENST00000458863 104 ntBASIC1.8□□□□□ -2.12
CCDC88CQ9P219 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 MTCO1P47-201ENST00000523889 1271 ntBASIC1.8□□□□□ -2.12
CCDC88CQ9P219 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 AC079791.1-201ENST00000605356 973 ntBASIC1.8□□□□□ -2.12
CCDC88CQ9P219 VN1R9P-201ENST00000614184 867 ntBASIC1.8□□□□□ -2.12
CCDC88CQ9P219 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.8□□□□□ -2.12
CCDC88CQ9P219 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 AL109809.4-201ENST00000603520 2185 ntBASIC1.8□□□□□ -2.12
CCDC88CQ9P219 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC88CQ9P219 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC88CQ9P219 HSPE1P11-201ENST00000339579 310 ntBASIC1.79□□□□□ -2.12
CCDC88CQ9P219 RNA5SP258-201ENST00000362750 119 ntBASIC1.79□□□□□ -2.12
CCDC88CQ9P219 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CCDC88CQ9P219 RNU6-883P-201ENST00000384597 107 ntBASIC1.79□□□□□ -2.12
CCDC88CQ9P219 TMSB4XP8-201ENST00000402089 135 ntBASIC1.79□□□□□ -2.12
CCDC88CQ9P219 RNU6-193P-201ENST00000410977 107 ntBASIC1.79□□□□□ -2.12
CCDC88CQ9P219 RPS15AP38-201ENST00000413110 372 ntBASIC1.79□□□□□ -2.12
CCDC88CQ9P219 RPL17P12-201ENST00000413391 526 ntBASIC1.79□□□□□ -2.12
CCDC88CQ9P219 TMSB4XP6-201ENST00000415187 135 ntBASIC1.79□□□□□ -2.12
CCDC88CQ9P219 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC88CQ9P219 TMSB4XP1-201ENST00000424567 135 ntBASIC1.79□□□□□ -2.12
CCDC88CQ9P219 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC88CQ9P219 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.79□□□□□ -2.12
CCDC88CQ9P219 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.79□□□□□ -2.12
CCDC88CQ9P219 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC88CQ9P219 RNA5SP310-201ENST00000459084 116 ntBASIC1.79□□□□□ -2.12
CCDC88CQ9P219 SETP11-201ENST00000473027 690 ntBASIC1.79□□□□□ -2.12
CCDC88CQ9P219 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC88CQ9P219 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms