Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 KLHL2P1-201ENST00000508691 521 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 AC023141.12-201ENST00000512399 199 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 AC100870.1-201ENST00000522035 505 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 AP001893.2-201ENST00000526949 202 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 AC109635.4-202ENST00000531666 412 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 AC128657.1-201ENST00000549459 145 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 RPL21P12-201ENST00000559810 515 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 AC007179.3-201ENST00000604976 235 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 BRDTP1-201ENST00000605735 677 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 AL590282.1-201ENST00000610379 1136 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 TUG1_2.1-201ENST00000614234 87 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 AC084757.4-201ENST00000616350 526 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 AL353748.2-201ENST00000622148 471 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 TAB3P1-202ENST00000452645 1634 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 PRO1804-201ENST00000623780 2050 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL20A1Q9P218 AP001350.1-201ENST00000601906 1524 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL20A1Q9P218 AC007656.2-201ENST00000624902 4547 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL20A1Q9P218 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL20A1Q9P218 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL20A1Q9P218 RNU5E-8P-201ENST00000363502 116 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 Y_RNA.333-201ENST00000365274 102 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 RNU6-108P-201ENST00000365558 107 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 RPS3AP24-201ENST00000407896 734 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 RNA5SP107-201ENST00000411358 122 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 ATP5HP2-201ENST00000433885 485 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 GPR143P-201ENST00000434155 205 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 AC090774.1-201ENST00000435925 246 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 AC079781.2-201ENST00000446424 169 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 AC016696.1-201ENST00000446949 318 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 RPS24P6-201ENST00000452670 400 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 PRSS3P4-201ENST00000453323 162 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 RBMY2UP-201ENST00000453474 324 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 AC022364.2-201ENST00000457963 554 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 AC078918.1-201ENST00000498515 228 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 AC114797.1-201ENST00000514003 728 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 RNU6-64P-201ENST00000517119 105 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL20A1Q9P218 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 AC125611.2-201ENST00000551907 647 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 SUB1P2-201ENST00000556401 297 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL20A1Q9P218 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 AL359880.1-201ENST00000621879 266 ntBASIC4.11□□□□□ -1.75
COL20A1Q9P218 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL20A1Q9P218 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL20A1Q9P218 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
COL20A1Q9P218 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL20A1Q9P218 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.1□□□□□ -1.75
COL20A1Q9P218 AL049781.1-201ENST00000623195 3585 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
COL20A1Q9P218 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
COL20A1Q9P218 HSPE1P11-201ENST00000339579 310 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 SNORD56.2-201ENST00000363242 71 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 RNU6-169P-201ENST00000365336 107 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 RNU6-282P-201ENST00000365357 103 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 RNA5SP167-201ENST00000365461 116 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 RNU6-456P-201ENST00000384493 107 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 RNVU1-14-201ENST00000384770 164 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 RN7SKP177-201ENST00000410567 355 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.1□□□□□ -1.75
COL20A1Q9P218 RPL21P24-201ENST00000413752 448 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.1□□□□□ -1.75
COL20A1Q9P218 MTCO1P39-201ENST00000426148 480 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.1□□□□□ -1.75
COL20A1Q9P218 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.1□□□□□ -1.75
COL20A1Q9P218 AC005094.1-201ENST00000440420 368 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 AL662791.1-201ENST00000441992 928 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.1□□□□□ -1.75
COL20A1Q9P218 RPS27AP1-201ENST00000475545 471 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 RPS26P15-201ENST00000488067 348 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 AC069499.1-201ENST00000489433 509 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.1□□□□□ -1.75
COL20A1Q9P218 RNU6-410P-201ENST00000517006 107 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.1□□□□□ -1.75
COL20A1Q9P218 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.1□□□□□ -1.75
COL20A1Q9P218 AC103843.2-201ENST00000530523 682 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms