Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.92□□□□□ -1.94
HPF1Q9NWY4 ZYG11AP1-201ENST00000430329 837 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AL671855.1-201ENST00000446875 1203 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.92□□□□□ -1.94
HPF1Q9NWY4 DPPA3P1-201ENST00000448050 469 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.92□□□□□ -1.94
HPF1Q9NWY4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.92□□□□□ -1.94
HPF1Q9NWY4 MRPS17P3-201ENST00000465453 385 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AC126182.1-201ENST00000478134 357 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AC103975.1-201ENST00000482506 483 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 RPL36AP51-201ENST00000487216 318 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 HMGB1P36-201ENST00000487709 576 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AP001025.2-201ENST00000490908 477 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AC006445.1-201ENST00000491925 405 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AC105252.1-201ENST00000503089 286 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.92□□□□□ -1.94
HPF1Q9NWY4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.92□□□□□ -1.94
HPF1Q9NWY4 MIR4325-201ENST00000583049 90 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AC006270.3-201ENST00000605967 1036 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AC090186.1-201ENST00000605991 572 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AC131235.4-201ENST00000609288 620 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AC245297.2-201ENST00000610119 565 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AC091903.1-201ENST00000624322 454 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 AC099063.3-201ENST00000642066 185 ntBASIC2.92□□□□□ -1.94
HPF1Q9NWY4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
HPF1Q9NWY4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HPF1Q9NWY4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
HPF1Q9NWY4 GNG5P1-201ENST00000255500 204 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HPF1Q9NWY4 RNU6-289P-201ENST00000364093 107 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.91□□□□□ -1.94
HPF1Q9NWY4 SNORA48.5-201ENST00000391143 135 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 Z92545.1-201ENST00000411782 234 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.91□□□□□ -1.94
HPF1Q9NWY4 HMGB1P49-201ENST00000418882 569 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 AL139281.1-201ENST00000422120 335 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.91□□□□□ -1.94
HPF1Q9NWY4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HPF1Q9NWY4 RPS15AP5-201ENST00000436276 388 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 COX7BP2-201ENST00000437976 242 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 MTCO1P53-201ENST00000441633 699 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.91□□□□□ -1.94
HPF1Q9NWY4 AC115115.1-201ENST00000449927 248 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.91□□□□□ -1.94
HPF1Q9NWY4 AC079395.1-201ENST00000510981 262 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 RNA5SP471-201ENST00000516971 106 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 SNORA31.18-201ENST00000517043 134 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 AL133271.1-201ENST00000538229 291 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HPF1Q9NWY4 YWHAZP1-201ENST00000556286 722 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 AC009712.1-201ENST00000564938 316 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.91□□□□□ -1.94
HPF1Q9NWY4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.91□□□□□ -1.94
HPF1Q9NWY4 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 MTND4LP5-201ENST00000605152 292 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 AC005000.2-201ENST00000605468 310 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.91□□□□□ -1.94
HPF1Q9NWY4 AL627309.6-201ENST00000606857 840 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 FTX_3.1-201ENST00000610451 147 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 TUG1_2.1-201ENST00000614234 87 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.91□□□□□ -1.94
HPF1Q9NWY4 MTND5P19-201ENST00000424872 1794 ntBASIC2.91□□□□□ -1.94
HPF1Q9NWY4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
HPF1Q9NWY4 AC009487.2-201ENST00000420969 6821 ntBASIC2.9□□□□□ -1.94
HPF1Q9NWY4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.9□□□□□ -1.94
HPF1Q9NWY4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
HPF1Q9NWY4 MIR422A-201ENST00000362286 90 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 RNU5E-10P-201ENST00000363506 118 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 RN7SKP226-201ENST00000364912 300 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
HPF1Q9NWY4 SNORD15B-201ENST00000384714 146 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 MIR128-1-201ENST00000384921 82 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 AL512633.1-201ENST00000399931 655 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 MIR888-201ENST00000401186 77 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 AL138885.1-201ENST00000405921 675 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.9□□□□□ -1.95
HPF1Q9NWY4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HPF1Q9NWY4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.9□□□□□ -1.95
HPF1Q9NWY4 NANOGP2-201ENST00000435391 727 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 AL445687.1-201ENST00000439946 251 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.9□□□□□ -1.95
HPF1Q9NWY4 RPS29P2-201ENST00000479278 136 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 AC108729.1-201ENST00000487812 947 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.9□□□□□ -1.95
HPF1Q9NWY4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.9□□□□□ -1.95
HPF1Q9NWY4 AC034159.1-201ENST00000513885 583 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 RNA5SP341-201ENST00000516261 117 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.9□□□□□ -1.95
HPF1Q9NWY4 MIR3117-201ENST00000584034 78 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
HPF1Q9NWY4 AF038458.1-201ENST00000588406 262 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 DUXAP3-201ENST00000603616 594 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 AC136601.2-201ENST00000604356 474 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms