Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RNU6-744P-201ENST00000365557 107 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 Y_RNA.414-201ENST00000384011 101 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 RNU6-1316P-201ENST00000384242 108 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 SNORA74C-2-201ENST00000411179 201 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 VDAC1P9-201ENST00000412766 841 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 TXNP1-201ENST00000441872 371 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 AC107399.1-201ENST00000451226 265 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 RPL12P25-201ENST00000455592 494 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 RPL21P71-201ENST00000465598 459 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 AC103843.2-201ENST00000530523 682 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 SNORD39.3-201ENST00000584451 71 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 AC022893.3-201ENST00000607665 437 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG3Q9NT62 AL162373.1-201ENST00000620433 407 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 MIR6075-201ENST00000620782 95 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG3Q9NT62 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG3Q9NT62 ASNSP1-201ENST00000518311 1939 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG3Q9NT62 AC006971.1-201ENST00000407916 4486 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG3Q9NT62 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
ATG3Q9NT62 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.49□□□□□ -1.53
ATG3Q9NT62 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
ATG3Q9NT62 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
ATG3Q9NT62 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG3Q9NT62 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
ATG3Q9NT62 AC025125.1-201ENST00000624743 1922 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 RPL23AP57-201ENST00000332361 466 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 RNA5SP307-201ENST00000362863 116 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 RNU6-853P-201ENST00000364306 107 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 RNU4-66P-201ENST00000365199 138 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 Y_RNA.574-201ENST00000384766 95 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 PRRC2CP1-201ENST00000404428 159 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 BX323014.1-201ENST00000412876 237 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 RPL37P10-201ENST00000412884 288 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 AC108032.1-201ENST00000416706 207 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.49□□□□□ -1.53
ATG3Q9NT62 RPS15AP12-201ENST00000419498 388 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG3Q9NT62 AC018865.2-201ENST00000423631 129 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 AC096644.2-201ENST00000429278 159 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 AC007389.2-201ENST00000434630 306 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 HMGB1P12-201ENST00000438594 598 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG3Q9NT62 AC079781.2-201ENST00000446424 169 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 RPS20P32-201ENST00000456044 356 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 Y_RNA.653-201ENST00000459091 95 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG3Q9NT62 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG3Q9NT62 RN7SKP46-201ENST00000515942 234 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 NCAPGP2-201ENST00000557911 754 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 HSPE1P3-201ENST00000559254 309 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.49□□□□□ -1.53
ATG3Q9NT62 AL356432.3-201ENST00000568952 465 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 HNRNPCP4-201ENST00000571636 900 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 AC024220.1-201ENST00000603675 484 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 AC010201.1-201ENST00000605051 540 ntBASIC5.49□□□□□ -1.53
ATG3Q9NT62 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG3Q9NT62 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
ATG3Q9NT62 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
ATG3Q9NT62 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG3Q9NT62 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.49□□□□□ -1.53
ATG3Q9NT62 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG3Q9NT62 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG3Q9NT62 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG3Q9NT62 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG3Q9NT62 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG3Q9NT62 FAM91A3P-201ENST00000456826 2544 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG3Q9NT62 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG3Q9NT62 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.48□□□□□ -1.53
ATG3Q9NT62 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG3Q9NT62 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG3Q9NT62 MTND5P28-201ENST00000438005 1594 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 RNA5SP391-201ENST00000363456 119 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 RNU6-209P-201ENST00000384118 107 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 AC074085.1-201ENST00000413598 418 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 AC233981.1-201ENST00000423224 461 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 AL445584.1-201ENST00000431451 330 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 RPL23AP15-201ENST00000450202 459 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG3Q9NT62 RPS15AP1-201ENST00000457423 391 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 RPL23AP65-201ENST00000475608 468 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.48□□□□□ -1.53
ATG3Q9NT62 AC068781.1-201ENST00000488231 618 ntBASIC5.48□□□□□ -1.53
ATG3Q9NT62 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms