Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 ANAPC10P1-201ENST00000395991 556 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AL122016.1-201ENST00000403365 367 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 LUZP4P1-201ENST00000415420 344 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 OR4K6P-201ENST00000416478 897 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AC013262.1-201ENST00000426710 252 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AL590233.1-201ENST00000430017 456 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 MTND2P5-201ENST00000432656 1006 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 MTCO3P11-201ENST00000455103 774 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 SUMO2P2-201ENST00000456482 255 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 MTND4LP3-201ENST00000468320 276 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 RPL31P41-201ENST00000477967 372 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AC113420.1-201ENST00000507903 571 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AC112673.1-201ENST00000513168 575 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 DEFB108D-201ENST00000527787 222 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AC010546.1-201ENST00000569391 485 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 MIR3921-201ENST00000577308 85 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 OR1M4P-201ENST00000589199 287 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 DUXAP11-201ENST00000603858 526 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AC007621.1-201ENST00000604544 437 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AL137847.3-201ENST00000611521 109 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AC084824.4-201ENST00000620106 731 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AC090772.4-201ENST00000623599 362 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 MKKS-204ENST00000639674 192 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AL022578.1-201ENST00000439330 1433 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 AL359693.1-201ENST00000614959 2407 ntBASIC2.39□□□□□ -2.03
TREX1Q9NSU2 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TREX1Q9NSU2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 U3.26-201ENST00000391236 204 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AL356131.1-201ENST00000405826 414 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 RNU2-42P-201ENST00000410697 113 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AC007064.1-201ENST00000412238 351 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 MTATP6P27-201ENST00000416987 621 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AC009963.1-201ENST00000417265 157 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 RPS15AP7-201ENST00000439294 405 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AC027673.1-201ENST00000456245 405 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 snoU13.28-201ENST00000459235 104 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AC026410.2-201ENST00000460281 156 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AC073901.1-201ENST00000462471 408 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AP001486.1-201ENST00000463339 476 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 RBM43P1-201ENST00000476891 1081 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AC026436.1-201ENST00000510537 270 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 SNORA31.18-201ENST00000517043 134 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 CASP1P1-201ENST00000526345 212 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 COX6CP5-201ENST00000527162 228 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 DUXAP3-201ENST00000603616 594 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AC005332.6-201ENST00000613178 446 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 AC011330.2-201ENST00000621680 635 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 MAPK10-266ENST00000641066 6555 ntBASIC2.38□□□□□ -2.03
TREX1Q9NSU2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
TREX1Q9NSU2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 RNU6-236P-201ENST00000363886 106 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 U3.12-201ENST00000364498 214 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 MIR506-201ENST00000384998 124 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AL079342.2-201ENST00000403367 482 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AC007742.1-201ENST00000425789 329 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 C1DP1-201ENST00000426049 402 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 ELOCP26-201ENST00000436067 329 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 ARF4P4-201ENST00000439608 520 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AL445687.1-201ENST00000439946 251 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
TREX1Q9NSU2 MTCYBP11-201ENST00000447254 1109 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AC079776.3-201ENST00000450665 370 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 AL353691.1-201ENST00000451332 387 ntBASIC2.37□□□□□ -2.03
TREX1Q9NSU2 SNORA59A-201ENST00000459326 152 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms