Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 PRO1804-201ENST00000623780 2050 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 RNU1-18P-201ENST00000363062 164 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 SNORD35B-201ENST00000363660 87 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 RN7SKP227-201ENST00000364445 330 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 RNA5SP515-201ENST00000364570 118 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 MIR493-201ENST00000385254 89 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 HMGN2P8-201ENST00000391458 268 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 RPL17P50-201ENST00000396131 546 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AL590002.1-201ENST00000406554 418 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 Z98941.1-201ENST00000407764 100 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 ISCA1P1-201ENST00000426679 387 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 BNIP3P2-201ENST00000441221 577 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 NEFMP1-201ENST00000443423 1006 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 MTATP6P30-201ENST00000443540 664 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AC093392.2-201ENST00000450682 337 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 RPS23P3-201ENST00000470993 430 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 RPL29P14-201ENST00000495837 428 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AC117522.1-201ENST00000509821 380 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 OR5G4P-201ENST00000525251 760 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 TOMM20P2-201ENST00000540082 421 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AC025627.2-201ENST00000576220 160 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AL391646.1-201ENST00000603860 190 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AL121992.2-201ENST00000606262 256 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AC126118.1-201ENST00000607744 628 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 U6atac.1-201ENST00000616025 117 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AL359880.1-201ENST00000621879 266 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AC139792.3-201ENST00000623525 224 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 AP005264.7-201ENST00000625003 745 ntBASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NECTIN3Q9NQS3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 Y_RNA.372-201ENST00000365599 102 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 RNA5SP283-201ENST00000365604 119 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 MIR181A1-201ENST00000385026 110 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 RNU4-6P-201ENST00000410804 122 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 UBE2V1P10-201ENST00000414685 269 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 MTCO2P19-201ENST00000427513 598 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 AL590383.1-201ENST00000428602 75 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 AL117339.2-201ENST00000430475 180 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 HMGB1P27-201ENST00000431429 603 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 HSFY6P-201ENST00000445573 403 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 AC020550.1-201ENST00000447385 163 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 AL162151.2-201ENST00000448875 158 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 AL132838.2-201ENST00000492041 314 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 RNU6-1256P-201ENST00000516539 103 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 MIR2116-201ENST00000517221 80 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 AP003072.2-201ENST00000527756 676 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 CBX3P5-201ENST00000552017 521 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 NCAPGP2-201ENST00000557911 754 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 AP005205.1-201ENST00000563503 508 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 MIR3160-1-201ENST00000577972 85 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 MIR4644-201ENST00000579929 84 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 AC244505.7-201ENST00000599675 272 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 U4.5-201ENST00000617137 123 ntBASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NECTIN3Q9NQS3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms