Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.65□□□□□ -1.51
EFCC1Q9HA90 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
EFCC1Q9HA90 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
EFCC1Q9HA90 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
EFCC1Q9HA90 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
EFCC1Q9HA90 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 NXPH1-205ENST00000602349 1953 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 RNU5E-6P-201ENST00000365574 115 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 Y_RNA.424-201ENST00000384063 103 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 Y_RNA.552-201ENST00000384665 112 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 RN7SKP159-201ENST00000410657 292 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 AC009965.2-201ENST00000425328 970 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 DYNLT3P2-201ENST00000442517 295 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 RPS5P7-201ENST00000456664 608 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 SNORA84-201ENST00000459229 133 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 DYNLL1P5-201ENST00000467158 270 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 RPL23AP55-201ENST00000498163 452 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 HMGB1P21-201ENST00000502313 581 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 SCARNA16.2-201ENST00000516520 172 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 HSBP1P1-201ENST00000555205 166 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 AC034105.4-201ENST00000568304 277 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 AC078899.3-201ENST00000599065 212 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 AC107871.2-201ENST00000612894 502 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 AC034229.5-201ENST00000624258 185 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
EFCC1Q9HA90 ZNF734P-201ENST00000419494 1534 ntBASIC5.64□□□□□ -1.51
EFCC1Q9HA90 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 MTND5P27-201ENST00000428871 1720 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 Y_RNA.210-201ENST00000364161 110 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 RHOT1P2-201ENST00000366423 333 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 RNU6-823P-201ENST00000391042 103 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 U3.30-201ENST00000391308 210 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 MIR548I3-201ENST00000408378 149 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 MIR548I1-201ENST00000408810 149 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 AC114755.2-201ENST00000413520 361 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 RPL22P13-201ENST00000493291 347 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 AP002812.1-201ENST00000495378 474 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 AC114801.2-201ENST00000503825 781 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 AC007375.1-201ENST00000554513 578 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 AC123786.2-201ENST00000603459 275 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 AC018462.2-201ENST00000605375 395 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 SNORD91B-202ENST00000608459 222 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 AC023043.4-201ENST00000612081 449 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 AP000756.2-201ENST00000624168 2567 ntBASIC5.63□□□□□ -1.51
EFCC1Q9HA90 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.63□□□□□ -1.51
EFCC1Q9HA90 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
EFCC1Q9HA90 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
EFCC1Q9HA90 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
EFCC1Q9HA90 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
EFCC1Q9HA90 AC010300.1-201ENST00000600671 5134 ntBASIC5.62□□□□□ -1.51
EFCC1Q9HA90 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.62□□□□□ -1.51
EFCC1Q9HA90 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
EFCC1Q9HA90 RNA5SP28-201ENST00000363841 119 ntBASIC5.62□□□□□ -1.51
EFCC1Q9HA90 RNA5SP509-201ENST00000364577 119 ntBASIC5.62□□□□□ -1.51
EFCC1Q9HA90 RNU6-1127P-201ENST00000384580 107 ntBASIC5.62□□□□□ -1.51
EFCC1Q9HA90 RNU6-328P-201ENST00000390887 106 ntBASIC5.62□□□□□ -1.51
EFCC1Q9HA90 SNORD70.1-201ENST00000391007 85 ntBASIC5.62□□□□□ -1.51
EFCC1Q9HA90 TBCAP2-201ENST00000416175 326 ntBASIC5.62□□□□□ -1.51
EFCC1Q9HA90 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms