Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNU6-493P-201ENST00000391321 108 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AL603910.2-201ENST00000407268 136 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 MIR1286-201ENST00000408112 78 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 MIR1178-201ENST00000408396 91 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 RNU6-174P-201ENST00000410406 106 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 Y_RNA.793-201ENST00000411222 111 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 RNA5SP111-201ENST00000411386 101 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AL139148.1-201ENST00000427122 680 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 FABP5P13-201ENST00000452144 328 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AC108161.1-201ENST00000461060 402 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AC098869.1-201ENST00000481627 292 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AC110792.1-201ENST00000491826 472 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 RN7SL441P-201ENST00000492388 296 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 COX7A2P2-201ENST00000505291 250 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 RNA5SP373-201ENST00000517271 95 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AC009643.1-201ENST00000532030 391 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AC107918.3-201ENST00000533272 382 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 SUMO2P15-201ENST00000604285 278 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 ELOCP5-201ENST00000604924 333 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AL589994.2-201ENST00000621124 579 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AL596275.2-204ENST00000641628 552 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AL596275.2-206ENST00000641957 626 ntBASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NUCKS1Q9H1E3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.59□□□□□ -1.52
NUCKS1Q9H1E3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NUCKS1Q9H1E3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
NUCKS1Q9H1E3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NUCKS1Q9H1E3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NUCKS1Q9H1E3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AL391987.6-201ENST00000305671 199 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AC138393.1-203ENST00000327086 343 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 RNU6-1284P-201ENST00000363701 100 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 Y_RNA.183-201ENST00000363882 113 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 UBBP2-201ENST00000376781 231 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 RNU6-1081P-201ENST00000384537 107 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 RNU6-516P-201ENST00000411381 104 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 EIF1P2-201ENST00000428233 350 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 PPIAP3-201ENST00000450588 505 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AL133244.1-201ENST00000456007 258 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AC091180.1-201ENST00000462104 372 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 RNU6-941P-201ENST00000516346 108 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 BNIP3P1-201ENST00000547295 580 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AC063949.1-201ENST00000552900 865 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 NDUFB4P11-201ENST00000560510 395 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 RPL10P14-201ENST00000565265 298 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AL355877.2-201ENST00000603670 358 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AL670379.6-201ENST00000603753 252 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AL670379.1-201ENST00000604752 252 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AL670379.5-201ENST00000605253 252 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AL670379.8-201ENST00000605353 252 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AL158032.1-201ENST00000605401 106 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AL670379.7-201ENST00000605823 252 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 LINC00901.1-201ENST00000617252 152 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AL592182.3-201ENST00000642132 3304 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 PABPC1P6-201ENST00000445594 1829 ntBASIC5.58□□□□□ -1.52
NUCKS1Q9H1E3 AC000374.1-201ENST00000434698 1745 ntBASIC5.57□□□□□ -1.52
NUCKS1Q9H1E3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUCKS1Q9H1E3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUCKS1Q9H1E3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NUCKS1Q9H1E3 Y_RNA.54-201ENST00000362766 105 ntBASIC5.57□□□□□ -1.52
NUCKS1Q9H1E3 U3.2-201ENST00000362981 210 ntBASIC5.57□□□□□ -1.52
NUCKS1Q9H1E3 U3.3-201ENST00000362986 216 ntBASIC5.57□□□□□ -1.52
NUCKS1Q9H1E3 RNY1P16-201ENST00000363063 111 ntBASIC5.57□□□□□ -1.52
NUCKS1Q9H1E3 Y_RNA.269-201ENST00000364685 89 ntBASIC5.57□□□□□ -1.52
NUCKS1Q9H1E3 AL139039.1-201ENST00000401900 692 ntBASIC5.57□□□□□ -1.52
NUCKS1Q9H1E3 U3.32-201ENST00000408116 212 ntBASIC5.57□□□□□ -1.52
NUCKS1Q9H1E3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.57□□□□□ -1.52
NUCKS1Q9H1E3 AC093655.2-201ENST00000425735 631 ntBASIC5.57□□□□□ -1.52
NUCKS1Q9H1E3 RPL35AP22-201ENST00000436855 335 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms