Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL137246.1-201ENST00000607072 977 ntBASIC2.22□□□□□ -2.05
TRIM4Q9C037 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.22□□□□□ -2.05
TRIM4Q9C037 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRIM4Q9C037 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRIM4Q9C037 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRIM4Q9C037 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRIM4Q9C037 MTND5P6-201ENST00000422338 1798 ntBASIC2.21□□□□□ -2.06
TRIM4Q9C037 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.21□□□□□ -2.06
TRIM4Q9C037 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.21□□□□□ -2.06
TRIM4Q9C037 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.21□□□□□ -2.06
TRIM4Q9C037 RNU1-17P-201ENST00000363022 152 ntBASIC2.21□□□□□ -2.06
TRIM4Q9C037 OR5H15-201ENST00000383696 930 ntBASIC2.21□□□□□ -2.06
TRIM4Q9C037 AL591416.1-201ENST00000404015 867 ntBASIC2.21□□□□□ -2.06
TRIM4Q9C037 AL024474.1-201ENST00000404655 591 ntBASIC2.21□□□□□ -2.06
TRIM4Q9C037 AL035410.1-201ENST00000427409 427 ntBASIC2.21□□□□□ -2.06
TRIM4Q9C037 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.21□□□□□ -2.06
TRIM4Q9C037 MTCO1P42-201ENST00000457379 726 ntBASIC2.21□□□□□ -2.06
TRIM4Q9C037 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.21□□□□□ -2.06
TRIM4Q9C037 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.21□□□□□ -2.06
TRIM4Q9C037 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.21□□□□□ -2.06
TRIM4Q9C037 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.21□□□□□ -2.06
TRIM4Q9C037 ANP32BP3-201ENST00000559213 706 ntBASIC2.21□□□□□ -2.06
TRIM4Q9C037 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.21□□□□□ -2.06
TRIM4Q9C037 AC040168.1-201ENST00000623594 991 ntBASIC2.21□□□□□ -2.06
TRIM4Q9C037 AC068880.5-201ENST00000624331 290 ntBASIC2.21□□□□□ -2.06
TRIM4Q9C037 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
TRIM4Q9C037 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM4Q9C037 SNORA46.1-201ENST00000391069 153 ntBASIC2.2□□□□□ -2.06
TRIM4Q9C037 FGF7P8-201ENST00000402994 292 ntBASIC2.2□□□□□ -2.06
TRIM4Q9C037 OR4K11P-201ENST00000431829 904 ntBASIC2.2□□□□□ -2.06
TRIM4Q9C037 FABP5P3-201ENST00000437960 408 ntBASIC2.2□□□□□ -2.06
TRIM4Q9C037 AC009296.1-201ENST00000443146 155 ntBASIC2.2□□□□□ -2.06
TRIM4Q9C037 TRBV26-201ENST00000456572 344 ntBASIC2.2□□□□□ -2.06
TRIM4Q9C037 OR5BM1P-201ENST00000512021 366 ntBASIC2.2□□□□□ -2.06
TRIM4Q9C037 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.2□□□□□ -2.06
TRIM4Q9C037 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.2□□□□□ -2.06
TRIM4Q9C037 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.2□□□□□ -2.06
TRIM4Q9C037 EIF1AXP2-201ENST00000555940 413 ntBASIC2.2□□□□□ -2.06
TRIM4Q9C037 MTCO1P40-201ENST00000574371 625 ntBASIC2.2□□□□□ -2.06
TRIM4Q9C037 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.2□□□□□ -2.06
TRIM4Q9C037 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.2□□□□□ -2.06
TRIM4Q9C037 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.2□□□□□ -2.06
TRIM4Q9C037 AC097714.1-201ENST00000511272 1647 ntBASIC2.2□□□□□ -2.06
TRIM4Q9C037 AC005539.1-201ENST00000443768 1479 ntBASIC2.2□□□□□ -2.06
TRIM4Q9C037 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.2□□□□□ -2.06
TRIM4Q9C037 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM4Q9C037 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
TRIM4Q9C037 ENSAP3-201ENST00000312710 333 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.19□□□□□ -2.06
TRIM4Q9C037 SNORA64-201ENST00000384674 134 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM4Q9C037 RN7SKP140-201ENST00000411196 284 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 AL030996.1-201ENST00000411430 235 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 PAICSP7-201ENST00000419829 962 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 AL445687.1-201ENST00000439946 251 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.19□□□□□ -2.06
TRIM4Q9C037 AC072039.1-201ENST00000477611 581 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 LINC00888-204ENST00000487386 421 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 AC090453.1-201ENST00000495560 436 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM4Q9C037 MTND4P2-201ENST00000507767 1203 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.19□□□□□ -2.06
TRIM4Q9C037 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM4Q9C037 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.19□□□□□ -2.06
TRIM4Q9C037 SNORA70.16-201ENST00000516390 95 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 RNU6-295P-201ENST00000516901 104 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.19□□□□□ -2.06
TRIM4Q9C037 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.19□□□□□ -2.06
TRIM4Q9C037 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.19□□□□□ -2.06
TRIM4Q9C037 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.19□□□□□ -2.06
TRIM4Q9C037 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.19□□□□□ -2.06
TRIM4Q9C037 MIR3609-201ENST00000582661 80 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM4Q9C037 AL121917.1-203ENST00000605534 577 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 AL391813.2-201ENST00000609113 322 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 CR589904.2-201ENST00000612533 440 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM4Q9C037 AC009812.4-201ENST00000569134 1805 ntBASIC2.19□□□□□ -2.06
TRIM4Q9C037 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM4Q9C037 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRIM4Q9C037 Y_RNA.122-201ENST00000363331 96 ntBASIC2.18□□□□□ -2.06
TRIM4Q9C037 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.18□□□□□ -2.06
TRIM4Q9C037 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.18□□□□□ -2.06
TRIM4Q9C037 EZH2P1-201ENST00000431167 291 ntBASIC2.18□□□□□ -2.06
TRIM4Q9C037 Z98742.2-201ENST00000431564 187 ntBASIC2.18□□□□□ -2.06
TRIM4Q9C037 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.18□□□□□ -2.06
TRIM4Q9C037 RPS15AP28-201ENST00000435088 386 ntBASIC2.18□□□□□ -2.06
TRIM4Q9C037 NDUFB4P6-201ENST00000436819 366 ntBASIC2.18□□□□□ -2.06
TRIM4Q9C037 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.18□□□□□ -2.06
TRIM4Q9C037 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.18□□□□□ -2.06
TRIM4Q9C037 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.18□□□□□ -2.06
TRIM4Q9C037 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.18□□□□□ -2.06
TRIM4Q9C037 AC008676.3-201ENST00000521237 435 ntBASIC2.18□□□□□ -2.06
TRIM4Q9C037 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.18□□□□□ -2.06
TRIM4Q9C037 TRAV28-201ENST00000557548 323 ntBASIC2.18□□□□□ -2.06
TRIM4Q9C037 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.18□□□□□ -2.06
TRIM4Q9C037 AC027104.1-201ENST00000563702 681 ntBASIC2.18□□□□□ -2.06
TRIM4Q9C037 AC010546.1-201ENST00000569391 485 ntBASIC2.18□□□□□ -2.06
TRIM4Q9C037 MIR5007-201ENST00000583098 95 ntBASIC2.18□□□□□ -2.06
TRIM4Q9C037 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms