Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC091042.1-201ENST00000579213 173 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 MIR4742-201ENST00000581069 85 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 MIR15A-201ENST00000607334 83 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 MIR6780A-201ENST00000615089 68 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 SNX18P1Y-201ENST00000616231 511 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AL136164.3-201ENST00000624429 3978 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 RNA5SP52-201ENST00000362448 134 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 RNU6-831P-201ENST00000384548 107 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 AL583835.1-201ENST00000399570 407 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 NDUFB4P5-201ENST00000415445 361 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 MRPL50P4-201ENST00000446432 475 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 AL513533.1-201ENST00000453728 415 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 RNA5SP471-201ENST00000516971 106 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 AP004242.1-201ENST00000533701 349 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 OR11H5P-201ENST00000554039 926 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 AL049839.1-201ENST00000556151 657 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 RPS3AP23-202ENST00000574601 686 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 RPL7P50-201ENST00000600588 727 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 AC092747.3-201ENST00000603769 301 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 uc_338.5-201ENST00000611839 155 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 AC090132.2-201ENST00000615881 347 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 AC009233.1-201ENST00000616477 371 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 C2orf27A-204ENST00000623058 969 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.69□□□□□ -1.66
TRIM55Q9BYV6 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 UBE2L2-201ENST00000254302 429 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 RN7SKP44-201ENST00000363602 316 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 RNU6-715P-201ENST00000365204 103 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 Y_RNA.530-201ENST00000384587 101 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 SNORD70.1-201ENST00000391007 85 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 RNA5SP113-201ENST00000410486 84 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 POLHP1-201ENST00000411806 470 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 AF186996.5-201ENST00000418098 904 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 BTF3L4P3-201ENST00000418879 476 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 MTND4P28-201ENST00000426217 387 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 DNAJC19P7-201ENST00000428811 344 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 AL356867.1-201ENST00000429623 299 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 NRBF2P3-201ENST00000432731 865 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 RPS17P8-201ENST00000434525 335 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 AF228730.2-201ENST00000438784 848 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 AC069285.2-201ENST00000440210 275 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 UBE2V1P7-201ENST00000446395 340 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 RNU6-329P-201ENST00000459618 107 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 RPS26P28-201ENST00000470806 348 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 RPS20P22-201ENST00000473700 357 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 APOOP4-201ENST00000513530 597 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 RNU6-914P-201ENST00000516749 109 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 RN7SKP256-201ENST00000517201 314 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 AC100770.1-201ENST00000532310 322 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 AC004024.1-201ENST00000549244 247 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 MTND6P33-201ENST00000571794 183 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 RN7SL652P-201ENST00000577769 300 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 CTHRC1P1-201ENST00000605383 469 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 AC007497.1-201ENST00000610421 561 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 AC007546.1-201ENST00000619452 559 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 AL022401.1-201ENST00000619498 108 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 MIR6758-201ENST00000620653 63 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 MIR7154-201ENST00000620673 73 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 AC121333.1-201ENST00000567488 2709 ntBASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms