Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU1-22P-201ENST00000363334 158 ntBASIC2.21□□□□□ -2.06
SCAPERQ9BY12 RNY1-201ENST00000364228 113 ntBASIC2.21□□□□□ -2.06
SCAPERQ9BY12 RNU1-93P-201ENST00000364704 169 ntBASIC2.21□□□□□ -2.06
SCAPERQ9BY12 AL136133.1-201ENST00000413694 376 ntBASIC2.21□□□□□ -2.06
SCAPERQ9BY12 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.21□□□□□ -2.06
SCAPERQ9BY12 RPS6P15-201ENST00000431996 751 ntBASIC2.21□□□□□ -2.06
SCAPERQ9BY12 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.21□□□□□ -2.06
SCAPERQ9BY12 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.21□□□□□ -2.06
SCAPERQ9BY12 HMGN1P8-201ENST00000463578 288 ntBASIC2.21□□□□□ -2.06
SCAPERQ9BY12 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.21□□□□□ -2.06
SCAPERQ9BY12 RNA5SP220-201ENST00000516298 104 ntBASIC2.21□□□□□ -2.06
SCAPERQ9BY12 RNU4-60P-201ENST00000517239 135 ntBASIC2.21□□□□□ -2.06
SCAPERQ9BY12 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.21□□□□□ -2.06
SCAPERQ9BY12 AP005435.4-201ENST00000529514 284 ntBASIC2.21□□□□□ -2.06
SCAPERQ9BY12 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.21□□□□□ -2.06
SCAPERQ9BY12 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.21□□□□□ -2.06
SCAPERQ9BY12 PSMA3P-201ENST00000555485 635 ntBASIC2.21□□□□□ -2.06
SCAPERQ9BY12 HSPE1P3-201ENST00000559254 309 ntBASIC2.21□□□□□ -2.06
SCAPERQ9BY12 OR4G1P-201ENST00000588632 938 ntBASIC2.21□□□□□ -2.06
SCAPERQ9BY12 AL078603.1-201ENST00000603824 313 ntBASIC2.21□□□□□ -2.06
SCAPERQ9BY12 AC096586.2-201ENST00000610260 441 ntBASIC2.21□□□□□ -2.06
SCAPERQ9BY12 AC091895.1-201ENST00000624494 256 ntBASIC2.21□□□□□ -2.06
SCAPERQ9BY12 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SCAPERQ9BY12 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.21□□□□□ -2.06
SCAPERQ9BY12 ZNF33CP-201ENST00000432492 2030 ntBASIC2.2□□□□□ -2.06
SCAPERQ9BY12 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SCAPERQ9BY12 RPS26P56-201ENST00000444468 240 ntBASIC2.2□□□□□ -2.06
SCAPERQ9BY12 AC234775.1-201ENST00000454247 670 ntBASIC2.2□□□□□ -2.06
SCAPERQ9BY12 MTATP6P22-201ENST00000507369 598 ntBASIC2.2□□□□□ -2.06
SCAPERQ9BY12 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.2□□□□□ -2.06
SCAPERQ9BY12 AC068944.2-201ENST00000610373 403 ntBASIC2.2□□□□□ -2.06
SCAPERQ9BY12 AL133216.2-202ENST00000634512 349 ntBASIC2.2□□□□□ -2.06
SCAPERQ9BY12 AC116618.1-201ENST00000634617 774 ntBASIC2.2□□□□□ -2.06
SCAPERQ9BY12 MIR3199-2-201ENST00000636243 86 ntBASIC2.2□□□□□ -2.06
SCAPERQ9BY12 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SCAPERQ9BY12 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SCAPERQ9BY12 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SCAPERQ9BY12 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.19□□□□□ -2.06
SCAPERQ9BY12 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.19□□□□□ -2.06
SCAPERQ9BY12 AC087373.1-201ENST00000524920 491 ntBASIC2.19□□□□□ -2.06
SCAPERQ9BY12 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.19□□□□□ -2.06
SCAPERQ9BY12 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.19□□□□□ -2.06
SCAPERQ9BY12 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SCAPERQ9BY12 AC080100.1-201ENST00000624239 5356 ntBASIC2.18□□□□□ -2.06
SCAPERQ9BY12 RNU6-461P-201ENST00000364195 107 ntBASIC2.18□□□□□ -2.06
SCAPERQ9BY12 AL355497.1-201ENST00000406262 551 ntBASIC2.18□□□□□ -2.06
SCAPERQ9BY12 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.18□□□□□ -2.06
SCAPERQ9BY12 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.18□□□□□ -2.06
SCAPERQ9BY12 AL445669.1-201ENST00000426743 755 ntBASIC2.18□□□□□ -2.06
SCAPERQ9BY12 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SCAPERQ9BY12 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.18□□□□□ -2.06
SCAPERQ9BY12 OR4V1P-201ENST00000525394 1140 ntBASIC2.18□□□□□ -2.06
SCAPERQ9BY12 AC011604.1-201ENST00000545978 196 ntBASIC2.18□□□□□ -2.06
SCAPERQ9BY12 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.18□□□□□ -2.06
SCAPERQ9BY12 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.18□□□□□ -2.06
SCAPERQ9BY12 AC010928.2-201ENST00000588017 287 ntBASIC2.18□□□□□ -2.06
SCAPERQ9BY12 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
SCAPERQ9BY12 AC022079.2-201ENST00000619739 566 ntBASIC2.18□□□□□ -2.06
SCAPERQ9BY12 AL158801.5-201ENST00000623123 465 ntBASIC2.18□□□□□ -2.06
SCAPERQ9BY12 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
SCAPERQ9BY12 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SCAPERQ9BY12 MTND5P3-201ENST00000438536 1800 ntBASIC2.18□□□□□ -2.06
SCAPERQ9BY12 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SCAPERQ9BY12 RNU6-600P-201ENST00000362524 99 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 SNORA51.2-201ENST00000364595 132 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 AL357078.2-201ENST00000416486 427 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 UBE2FP3-201ENST00000436366 524 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.17□□□□□ -2.06
SCAPERQ9BY12 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.17□□□□□ -2.06
SCAPERQ9BY12 AC146507.1-201ENST00000468335 354 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 RPS29P20-201ENST00000489592 171 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 AC034222.1-201ENST00000494052 532 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 SNORA31.23-201ENST00000517219 133 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.17□□□□□ -2.06
SCAPERQ9BY12 DNAJC8P1-201ENST00000554535 372 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.17□□□□□ -2.06
SCAPERQ9BY12 MIR6078-201ENST00000611069 100 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 MIR6734-201ENST00000621166 68 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SCAPERQ9BY12 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SCAPERQ9BY12 Y_RNA.354-201ENST00000365448 111 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 MIR613-201ENST00000385248 95 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.17□□□□□ -2.06
SCAPERQ9BY12 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.17□□□□□ -2.06
SCAPERQ9BY12 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.17□□□□□ -2.06
SCAPERQ9BY12 RPS4XP11-201ENST00000446897 772 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.17□□□□□ -2.06
SCAPERQ9BY12 MTCO1P40-201ENST00000574371 625 ntBASIC2.17□□□□□ -2.06
SCAPERQ9BY12 RNU1-52P-201ENST00000384190 164 ntBASIC2.16□□□□□ -2.06
SCAPERQ9BY12 MT-TP-201ENST00000387461 68 ntBASIC2.16□□□□□ -2.06
SCAPERQ9BY12 RNA5SP38-201ENST00000410750 119 ntBASIC2.16□□□□□ -2.06
SCAPERQ9BY12 HMGB1P26-201ENST00000452520 628 ntBASIC2.16□□□□□ -2.06
SCAPERQ9BY12 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.16□□□□□ -2.06
SCAPERQ9BY12 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SCAPERQ9BY12 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.16□□□□□ -2.06
SCAPERQ9BY12 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.16□□□□□ -2.06
SCAPERQ9BY12 OR6C73P-201ENST00000546432 358 ntBASIC2.16□□□□□ -2.06
SCAPERQ9BY12 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms