Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AL359643.1-201ENST00000404109 423 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 UBE2FP1-201ENST00000416536 447 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AL353193.1-201ENST00000421444 268 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 GPR143P-201ENST00000434155 205 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 TAAR7P-201ENST00000436141 242 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 RPL23AP20-201ENST00000447965 421 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AL162389.1-201ENST00000449233 177 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 NDUFS5P3-201ENST00000450668 321 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 RPS24P6-201ENST00000452670 400 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 SNORD97-201ENST00000459187 142 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 RPS15AP36-201ENST00000492022 382 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AC020893.1-201ENST00000502452 580 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 KLHL2P1-201ENST00000508691 521 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AC010486.1-201ENST00000511793 424 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AC022616.3-201ENST00000523940 148 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 CYCSP30-201ENST00000546447 172 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AC007424.1-203ENST00000554613 687 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 MTCYBP13-201ENST00000578634 1093 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AC011712.1-201ENST00000588959 234 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AC068790.5-201ENST00000602741 355 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AL022099.1-201ENST00000604551 712 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AL031666.3-201ENST00000609320 1006 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AL132765.2-201ENST00000610812 351 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 TUG1_2.1-201ENST00000614234 87 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 AL133412.1-201ENST00000380194 2992 ntBASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRFN3Q9BTN0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AP001350.1-201ENST00000601906 1524 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 RNU6-1284P-201ENST00000363701 100 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 RNY3P3-201ENST00000363816 102 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 RNU6-629P-201ENST00000384061 103 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 RNA5SP107-201ENST00000411358 122 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 RPL12P9-201ENST00000412942 488 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 PDCL2P1-201ENST00000419302 352 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC005094.1-201ENST00000440420 368 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 RNU6-420P-201ENST00000458780 107 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 RPS20P20-201ENST00000460498 340 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC010285.1-201ENST00000470580 392 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 RN7SL323P-201ENST00000494712 295 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC078918.1-201ENST00000498515 228 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 RNU7-51P-201ENST00000516560 62 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 RNU6-410P-201ENST00000517006 107 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC006349.1-201ENST00000555526 235 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC105224.1-201ENST00000587055 421 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 BPIFA4P-203ENST00000603168 689 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC013553.2-201ENST00000604244 589 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC007621.1-201ENST00000604544 437 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 RMST_3.1-201ENST00000611651 109 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AL021997.2-201ENST00000615674 271 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AL713922.2-201ENST00000619384 716 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AL160413.1-201ENST00000622780 310 ntBASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN3Q9BTN0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms