Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 NAMPTP2-201ENST00000505629 1115 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC114322.1-201ENST00000506771 926 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC107222.1-201ENST00000510899 637 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC007115.1-201ENST00000546853 234 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC125611.1-201ENST00000549563 229 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC121758.2-201ENST00000553271 193 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 HSPE1P3-201ENST00000559254 309 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC068135.2-201ENST00000569293 1028 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 MIR4637-201ENST00000582405 84 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC060766.3-201ENST00000591442 263 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AL390838.2-201ENST00000602394 274 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC013553.2-201ENST00000604244 589 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AL137847.3-201ENST00000611521 109 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 MKKS-204ENST00000639674 192 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC131280.1-202ENST00000624067 4211 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AL022578.1-201ENST00000439330 1433 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AL049641.1-201ENST00000441055 1948 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AL136360.1-201ENST00000503377 1900 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 SET-203ENST00000372688 801 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 MIR181A2-201ENST00000384863 110 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AL139039.1-201ENST00000401900 692 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AL592310.1-201ENST00000414330 671 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 Z85995.1-201ENST00000415547 335 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AC099548.1-201ENST00000421443 426 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AC092634.2-201ENST00000428146 1010 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 WASF1P1-201ENST00000447560 1131 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 RPS15AP17-201ENST00000470598 390 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AL049874.1-201ENST00000489560 388 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AC022861.1-201ENST00000522981 663 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 HSPA8P13-201ENST00000523715 472 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AP003049.1-201ENST00000529418 457 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AC245517.5-201ENST00000611529 162 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AC005332.6-201ENST00000613178 446 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 CR381653.2-201ENST00000624041 768 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 MIR203B-201ENST00000636080 86 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 AP003399.1-201ENST00000637534 361 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 CR848007.1-201ENST00000442354 1699 ntBASIC1.82□□□□□ -2.12
UPK3BQ9BT76 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
UPK3BQ9BT76 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 MTCO1P9-201ENST00000505577 1534 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 SNRPEP3-201ENST00000338402 276 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 RNU6-216P-201ENST00000363282 104 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 RNU2-52P-201ENST00000410680 190 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AL592148.1-201ENST00000413568 445 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 MTND1P23-201ENST00000416931 372 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 MTCYBP3-201ENST00000445588 1137 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AC011753.1-201ENST00000451001 220 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AC108938.1-201ENST00000451204 136 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AC244505.3-201ENST00000454598 187 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AL135752.1-201ENST00000479477 471 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.81□□□□□ -2.12
UPK3BQ9BT76 AC017037.2-201ENST00000513850 890 ntBASIC1.81□□□□□ -2.12
UPK3BQ9BT76 SNORA31.22-201ENST00000517204 135 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms