Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.31□□□□□ -2.2
LIMD2Q9BT23 MIR3122-201ENST00000577243 73 ntBASIC1.31□□□□□ -2.2
LIMD2Q9BT23 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.31□□□□□ -2.2
LIMD2Q9BT23 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.31□□□□□ -2.2
LIMD2Q9BT23 AC015688.2-201ENST00000584523 262 ntBASIC1.31□□□□□ -2.2
LIMD2Q9BT23 AC090132.2-201ENST00000615881 347 ntBASIC1.31□□□□□ -2.2
LIMD2Q9BT23 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.31□□□□□ -2.2
LIMD2Q9BT23 SCARNA15.3-201ENST00000626315 122 ntBASIC1.31□□□□□ -2.2
LIMD2Q9BT23 SCARNA4.1-201ENST00000628597 123 ntBASIC1.31□□□□□ -2.2
LIMD2Q9BT23 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
LIMD2Q9BT23 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
LIMD2Q9BT23 MTCO1P18-201ENST00000455518 1419 ntBASIC1.31□□□□□ -2.2
LIMD2Q9BT23 Z99496.1-201ENST00000469424 1477 ntBASIC1.31□□□□□ -2.2
LIMD2Q9BT23 DDX10P1-201ENST00000448545 1933 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 MIR21-201ENST00000362134 72 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 SNORA27.3-201ENST00000364937 134 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 SNORA36C-201ENST00000384289 132 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 MIR634-201ENST00000385208 97 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AC016691.1-201ENST00000441321 413 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AC009237.8-201ENST00000445492 379 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 HIGD1AP2-201ENST00000446367 280 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 Z82190.1-201ENST00000454534 490 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 MTCO3P2-201ENST00000457365 171 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AC025033.1-201ENST00000463883 194 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AC093767.1-201ENST00000504523 156 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 RNU4-29P-201ENST00000515943 174 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 RN7SKP31-201ENST00000516354 278 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AC027309.2-201ENST00000520566 192 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AP005902.1-201ENST00000521358 186 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 TRAV11-201ENST00000539512 339 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AC009063.1-201ENST00000563342 702 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AC068135.2-201ENST00000569293 1028 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 SNORD39.3-201ENST00000584451 71 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 BX322635.1-201ENST00000605804 496 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AC009831.4-201ENST00000620744 325 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 AC090617.9-201ENST00000623751 147 ntBASIC1.3□□□□□ -2.2
LIMD2Q9BT23 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
LIMD2Q9BT23 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.29□□□□□ -2.2
LIMD2Q9BT23 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
LIMD2Q9BT23 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
LIMD2Q9BT23 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
LIMD2Q9BT23 RNA5SP27-201ENST00000363839 119 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 Z85995.1-201ENST00000415547 335 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 SPA17P1-201ENST00000416656 452 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 AC099548.1-201ENST00000421443 426 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 RPL31P63-201ENST00000422565 375 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 PNRC2P1-201ENST00000423940 420 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 AL009174.1-201ENST00000426577 416 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 AL356320.1-201ENST00000429616 163 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 RPL31P54-201ENST00000429803 370 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 MICF-203ENST00000432679 129 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 MTND2P21-201ENST00000436242 1042 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.29□□□□□ -2.2
LIMD2Q9BT23 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.29□□□□□ -2.2
LIMD2Q9BT23 MTATP6P7-201ENST00000453315 681 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 PMCHL2-203ENST00000457791 237 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 MTND4LP3-201ENST00000468320 276 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 AC128713.1-201ENST00000471495 306 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 AC126389.1-201ENST00000477436 290 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 AC006390.1-201ENST00000508068 283 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 AC109464.2-201ENST00000510242 943 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.29□□□□□ -2.2
LIMD2Q9BT23 SETP7-201ENST00000552169 453 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 ATP5F1P7-201ENST00000567330 760 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 LRRC37A5P-203ENST00000580181 585 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 OR4K7P-201ENST00000580232 945 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 AC090897.2-201ENST00000581715 130 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 MIR4435-1-201ENST00000582552 80 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.29□□□□□ -2.2
LIMD2Q9BT23 AL161423.1-201ENST00000613700 262 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.29□□□□□ -2.2
LIMD2Q9BT23 AC011330.2-201ENST00000621680 635 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.29□□□□□ -2.2
LIMD2Q9BT23 MTND4P27-201ENST00000450813 1354 ntBASIC1.29□□□□□ -2.2
LIMD2Q9BT23 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms