Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 RNU6-50P-201ENST00000362356 103 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 SNORA71.3-201ENST00000362582 128 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 RNA5SP374-201ENST00000362939 125 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 SNORA36C-201ENST00000384289 132 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 MIR1305-201ENST00000408300 86 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC109780.2-201ENST00000413467 845 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC233728.2-201ENST00000425348 757 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AL593851.1-201ENST00000426171 157 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 OR4K11P-201ENST00000431829 904 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 UBE2FP3-201ENST00000436366 524 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 NIPA2P5-201ENST00000452282 464 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC022447.3-201ENST00000506865 495 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 GMPSP1-201ENST00000514075 579 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 SCGB1D5P-201ENST00000515134 247 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 SNORD59.2-201ENST00000516873 68 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 RNU6-711P-201ENST00000517255 106 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC103783.1-201ENST00000520506 373 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 ZNF321P-202ENST00000550843 495 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC125611.2-201ENST00000551907 647 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC002400.1-201ENST00000569310 726 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC010653.1-201ENST00000571108 881 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 ZNF861P-201ENST00000588126 639 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AL353778.1-201ENST00000603149 408 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AP000811.1-201ENST00000603803 651 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC011451.2-201ENST00000604303 598 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC063944.3-201ENST00000609969 533 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC106028.5-201ENST00000610332 395 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC004696.1-201ENST00000614345 607 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC090132.2-201ENST00000615881 347 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AL031667.3-201ENST00000620124 655 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC012150.2-201ENST00000621300 544 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 Z82195.2-201ENST00000612348 18351 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 AC009902.3-201ENST00000606235 2172 ntBASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.36□□□□□ -2.03
HDHD3Q9BSH5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 AC103988.1-201ENST00000566382 2177 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 RNU6-500P-201ENST00000362349 107 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 Y_RNA.302-201ENST00000364997 102 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 RNU6-114P-201ENST00000384704 105 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 AL512633.1-201ENST00000399931 655 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 MTCO1P17-201ENST00000411522 491 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 AC011233.1-201ENST00000422812 283 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 AC010099.3-201ENST00000423896 409 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 YME1L1P1-201ENST00000429435 297 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 AC022018.1-201ENST00000430685 241 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 THAP5P1-201ENST00000439089 262 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 COX6CP2-201ENST00000444980 225 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 AC140076.1-201ENST00000449897 361 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 RPL36AP33-201ENST00000450395 310 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 GSTA11P-201ENST00000452866 669 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 AC017015.1-201ENST00000477387 286 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 AC004263.1-201ENST00000479327 332 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 AC104685.1-201ENST00000502445 371 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 AC074250.1-201ENST00000511117 192 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 SNORA9.3-201ENST00000516383 129 ntBASIC2.35□□□□□ -2.03
HDHD3Q9BSH5 PSMA2P1-201ENST00000526365 646 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms